Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1353 ATGGGAAACTGTCTAGCTCGTCAATCAGATTCTCCAAATTCTCGTAGCAACTCCAACAATGGCGCCAACAACAACCAATTAGGGAGCTGCCAATTATCGATCAGACACAATAATTCGAGACTCTTGCAGAGTACAAGCAGTTCCACTCTGCTTGGACGAAGCAGCATCTCTGCTGGAAATAGCAGGCTATTTGGACCAAGTAGCAGTAACACATACACAACCAGCAATACGAATACATCTCTTTTAGGCTCTGATATCAGCCAAACGTTTAAAGTAAGAGGTGAAGAGGAGTTTCCTAATGGGCAGATCTTGGATGTGGCAAACTTGATAGATTTCACTTTTGAGGAACTGAAGGCAGCAACTAGAAATTTCAGACCCGACTCTGTACTAGGAGAGGGAGGCTTTGGCAGGGTGTACAAGGGTTGGCTTAAAGATAGAGCATCATCAAGTAATAACAGATATGAGGGATTGGTTGTTGCCGTCAAGAGATTGAATTCCGATAGCACACAAGGAATTACGGAATGGCAGTCAGAGGTGAATTTCTTAGGAAGGCTTTCTCACCCCAACCTTGTAAAGTTGTATGGATATGGAAGGGAAAATGGAGAGCTATTTCTGGTGTATGAATACATGCACCGAGGCAGCTTGGCTAACCATATATTCGGAAGAGGATCAAATGTACGGCCACTGCCATGGGACACAAGGTTAAAGATTATGATTGGAGCAGCTAGGGGCCTAAATTTCTTGCACTCGTTAGAGAATAGAATCATATACAGAGATTTTAAGCCATCCAATATCTTACTTGACAAGAGCTACATAGCCAAGTTAGCAGACTTCGGTTTGGCCAAAACTGTTCCTTCTGGCGGCAGGACTCATGTGACGACAAGGGTGATGGGAACTTACGGTTATGCAGCCCCTGAGTACGTGGTCACAGGTCACCTGACTATGAAAAGCGACGTGTATGGATTTGGGATTGTTTTGGTGGAGATATTGACAGGCAAAGCGATATCTGATATACTTAAGCATATGGGTAAGGACCAATCATTAGTTGATTGGATCAAGGCAAATCTATTGAGTAGATGGAAGATGAGGGAGACGATGGACAGAAGATTGGAGGGGAAATATCCACCCAAGTTAGCATTACAAGTAGCTCAACTTGCTCTAAAATGTGTGGGAACGGAGTATAAACTCAGGCCACCAATGAAAGAAGTTGTCGAGGCATTAGAACAGGTTGAGGCAGCAAATGATAAAACTACTGACATCAGAAAACGTGCCATTCATTCTGGAGCAGCTCAACTTCATGGTCGCCCAGATGGAGGTTAA 1320 0.4386 MGNCLARQSDSPNSRSNSNNGANNNQLGSCQLSIRHNNSRLLQSTSSSTLLGRSSISAGNSRLFGPSSSNTYTTSNTNTSLLGSDISQTFKVRGEEEFPNGQILDVANLIDFTFEELKAATRNFRPDSVLGEGGFGRVYKGWLKDRASSSNNRYEGLVVAVKRLNSDSTQGITEWQSEVNFLGRLSHPNLVKLYGYGRENGELFLVYEYMHRGSLANHIFGRGSNVRPLPWDTRLKIMIGAARGLNFLHSLENRIIYRDFKPSNILLDKSYIAKLADFGLAKTVPSGGRTHVTTRVMGTYGYAAPEYVVTGHLTMKSDVYGFGIVLVEILTGKAISDILKHMGKDQSLVDWIKANLLSRWKMRETMDRRLEGKYPPKLALQVAQLALKCVGTEYKLRPPMKEVVEALEQVEAANDKTTDIRKRAIHSGAAQLHGRPDGG 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1353 439 MobiDBLite consensus disorder prediction 1 28 - -
Prci4g1353 439 ProSitePatterns Protein kinases ATP-binding region signature. 130 162 IPR017441 GO:0005524
Prci4g1353 439 ProSiteProfiles Protein kinase domain profile. 124 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1353 439 FunFam Serine/threonine-protein kinase BIK1 92 209 - -
Prci4g1353 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Prci4g1353 439 Gene3D Phosphorylase Kinase; domain 1 109 209 - -
Prci4g1353 439 PANTHER OS01G0588500 PROTEIN-RELATED 49 411 - -
Prci4g1353 439 Pfam Protein kinase domain 127 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1353 439 Gene3D Transferase(Phosphotransferase) domain 1 210 431 - -
Prci4g1353 439 CDD STKc_IRAK 130 409 - -
Prci4g1353 439 SUPERFAMILY Protein kinase-like (PK-like) 109 409 IPR011009 -
Prci4g1353 439 FunFam PTI1-like tyrosine-protein kinase 3 210 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1353 Prci-Chr4 10935349 10938850 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1353 112 411 Receptor kinase-like Gene Family AT4G02010 47.525 1.55e-85 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci4g1353 Pkinase 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1353 - - pcin:129308416 786.949