Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1350 ATGGCTGTGGATCTCGTAGGCCTTCCCAGGAAGATGGAAGAACAGATGGCTATTCAAGAGGTTGCTTCTGCTGGCTTGAAGAGCATGGAACATTTCATTCGTCTTCTTAATTCTTCTGACTCTGCCCCTTCTTCTGATAATCCCCATCGTCTCGACTGTACCCATCTCACCGACCTCACCGTCTCCAAGTTCAAGCAGGTCATCAACTTACTCAATCGCACAGGTCACGCTCGCTTCCGTCGTGCTCCTTCTCACAATCCCAATCCTCCTTCCTCGTCTCCTTCTGCTCTTCCTAATCCGTCCCAATCGGACCGCCTCGCTCTGAATTCGGTTCACTCTCAGGGTTTGACCCTTGATTTTGCCAAGCCCTGTAAGGTCAAGACTGCGCAGTCCAAACCTTCCACCGAGTTATCCGTGTCTCAGTACTCCAAGGACACCTTTAGTATCTCCCCTCCCATTTCGACCACCAGCTCCTCCTTTATGTCTTCTATCACCGGAGACGGCAGCGTTTCCGACGGAAAAATAGGTCCCTCCCTGCTTCCTCCGCCCGCTCCCGTCGTCTCCGCCGGTAAACCCCCTCTCTCCTCGTCTCACCGGAAAAGGTGTCATGATTCGGCTTTCTCTGAGAAGATTTCTTCCTCCGGTCACTGCCATTGCTCTAAGAGAAGGAAATCTCGAGTTAAAAAGACGATCCGCGTGCCGGCGATAAGCTCGAAGATGGCCGATATTCCGCCGGACGAGTTTTCTTGGAGAAAGTACGGTCAGAAGCCTATCAAGGGTTCGCCCTACCCTCGTGGGTATTACAAGTGCAGTACCGTGAGAGGCTGTCCGGCGAAAAAGCATGTTGAGCGAGCCCTAGACGATCCCAAGATGCTGATCGTGACATACGAAGGGGAACACCGTCACGCTCCGGAAGCGCGTGCGGCGGAGTGCGGCGGTGCAGGCATCACTCTTAGCCTTCAGGCCAGTTAA 972 0.536 MAVDLVGLPRKMEEQMAIQEVASAGLKSMEHFIRLLNSSDSAPSSDNPHRLDCTHLTDLTVSKFKQVINLLNRTGHARFRRAPSHNPNPPSSSPSALPNPSQSDRLALNSVHSQGLTLDFAKPCKVKTAQSKPSTELSVSQYSKDTFSISPPISTTSSSFMSSITGDGSVSDGKIGPSLLPPPAPVVSAGKPPLSSSHRKRCHDSAFSEKISSSGHCHCSKRRKSRVKKTIRVPAISSKMADIPPDEFSWRKYGQKPIKGSPYPRGYYKCSTVRGCPAKKHVERALDDPKMLIVTYEGEHRHAPEARAAECGGAGITLSLQAS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1350 323 MobiDBLite consensus disorder prediction 155 177 - -
Prci4g1350 323 FunFam WRKY transcription factor 65 228 305 - -
Prci4g1350 323 SMART WRKY_cls 244 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci4g1350 323 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 308 IPR044810 GO:0003700
Prci4g1350 323 MobiDBLite consensus disorder prediction 79 104 - -
Prci4g1350 323 MobiDBLite consensus disorder prediction 155 169 - -
Prci4g1350 323 SUPERFAMILY WRKY DNA-binding domain 242 303 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci4g1350 323 ProSiteProfiles WRKY domain profile. 239 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci4g1350 323 Gene3D WRKY domain 228 305 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci4g1350 323 Pfam WRKY DNA -binding domain 246 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci4g1350 323 Pfam Plant zinc cluster domain 199 242 IPR018872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1350 Prci-Chr4 10898079 10899687 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1350 1 302 WRKY Transcription Factor Family AT2G24570 57.278 7.64e-100 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci4g1350 WRKY 2.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1350 - - qsa:O6P43_022388 347.436