Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1339 ATGAATCTCTTGAAGAATTCACCTCGTCACCATAGTGACATTGAGGCCGGAAGTAGCAGCCACTGCGATTATGACGACGCAGAAAGTTCGTCTGATCCATTTGTTATTCCAAGAACGAAGGATGCTCCTATTCAACGCCTCAAACGTTGGAGGCAAGCCGCGCTTGTGCTTAATGCTTCTCGTCGGTTCCGTTACACATTGGACTTGAAAAAAGAAGAGGAGAATCGGCAAATATTGGGGAAGATAAGGGTTCATGCAGAAGCAATTAGAGCTGCATATCTTTTCAAAGGTGCTGCTATAAACGGGGGGAATGAAATCACACCTCCTCACCCACGCCCAGTTGGTGACTTTGGTATCGGAAATGAAGAACTTCTTTCAATTTCTAGGGATCATAAAGTTGATGTCCTCCAACAATATGGTGGGGCTAGAGGGCTATCAGAATTGTTGAAATCTAGTACAGAGAAGGGGATTAATGGTGATGATGCAGATCTAATAAAAAGAAGAAATGCTTTTGGTTCAAACAATTATCCTCGAAAGAAAGGAAGGAGTTTTTGGATGTTTTTGTGGGATGCTTGCAAGGATCTGACCTTGATGATATTAATGGTAGCTGCGGCAGCTTCATTAGCACTAGGAATAAAAACTGAGGGTATTAAGGAAGGATGGTATGATGGGGGCAGCATTGCTTTTGCAGTAATTCTTGTTATTGTTGTTACAGCTATAAGCGATTATAAACAGTCTCTTCAGTTTCAACATCTGAATGACGAGAAGAGAAATATACATTTAGAGGTTATAAGAGGTGGTAGAAGGGTTGAGATCTCTATATATGACATCGTTGTTGGTGATGTTGTGCCCCTTAATATCGGTAACCAGGTCCCTGCCGATGGTATCTTGATCACTGGTCACTCTCTTGCTATTGATGAATCAAGTATGACTGGGGAGAGCAAGACTGTCTATAAGGACTCTAAAAACCCTTTTCTGATGTCTGGATGTAAAGTTGCAGATGGCAGTGGCACCATGCTGGTACTCGGTGTTGGTTTAAATACTGAATGGGGGCTTCTGATGTCTAGTATTTCAGAAGACAATGGTGAAGAAACGCCCTTACAGGTACGTTTAAATGGTGTTGCCACTTTCATTGGTATTGTTGGACTCTCTGTTGCTGTTATCGTTTTGATTGTGTTGTTGGCCAGATATTTCTCTGGGCATACTAGAGATGCAAATGGCAATGTTGAATTTAAGGCAGGCAAGACAAAAATTGGTGATGCAATTAATGGGGCAATTAAAATAGTTACAGTTGCGGTGACCATTGTTGTAGTTGCAGTGCCCGAAGGGCTTCCTCTAGCAGTTACCTTAACACTGGCTTACTCAATGAGAAAAATGATGGCGGACAAAGCTTTGGTGAGGAGGCTTTCAGCCTGTGAGACAATGGGCTCTGCAACAACCATTTGTAGTGATAAGACTGGTACATTGACCATGAATAAGATGACTGTGGTTAAGGTGTACAGTGGTGGGAAGAAGATTGGACCTGACAGCAAGTCAGAGCTCTCTCCGAATCTCTGCAATTTGATCACTGAAGGTGTTGCACAGAACACCAATGGCAGTGTCTCTATGGTTGGGGGTGATGTTGAGGTTTCTGGATCACCAACAGAAAAGGCAATTTTACATTGGGGAATTAAGATGGGGATGAATTTTGAGGCTGTCAGATCAGAGTCATCAATTATTCATGTCTTTCCATTTAATTCAGAGAAAAAACGTGGTGGAGTTGCAGTAAAGACGTCTGACTCTCAAGTTCACATACATTGGAAAGGTGCTGCTGAGATAGTCCTAGCCTGTTGTACATGGTATATTGAAGCAACCGGCCAGCTAGTGAAGATGGATGATAAGAAGATGGCATTTTTTCAAAAAGCTATTGAAGATATGGCTTCTGATAGTCTACGTTGTGTTGCCATGGCATATAGATCATATGAAATGACAAGTGTTCCAACTAGTGAAGAAGAACTTGCTCACTGGTCATTACCAGAGGATGATCTCATCTTACTGGCTATTGTTGGTCTGAAGGATCCCTGTCGACCTGGTGTCAGAGAGGCTGTGCAACTTTGCCAAAAAGCTGGAGTTAAGGTACGAATGGTTACTGGTGACAACTTAGAAACTGCAAAATCAATTGCTATAGAGTGTGGAATACTTCGAACATCGGCAGAAGCTGTGGAGCCCTACATCATTGAGGGGAAATCATTTCGTGCATTGTCAGATGAAGCCAGAGAAAAAGTTGCCCAAAATTTATTGGTTATGGGAAGGTCTTCTCCCAATGACAAGCTTCTGCTTGTGAAAGCATTGAGGAAGATGGGGCATGTTGTGGCTGTTACAGGAGATGGAACTAATGATGCTCCCGCCCTACATGAGGCAGATGTAGGTCTTGCAATGGGCATACAAGGGACAGAAGTTGCTAAGGAGAGCTCAGATATCATTATTTTGGACGACAACTTTGCTTCGGTTGTGAAGGTTGTCAGATGGGGGCGGTCTGTATATGCAAACATTCAGAAATTTATCCAGTTCCAACTTACCGTCAATGTTGCAGCTCTGGTTATTAATGTTATTTCTGCAGTTTCCTCTGGCGATGTCCCACTAAATGCAGTACAGCTTCTTTGGGTAAATCTCATCATGGACACACTTGGAGCACTTGCCTTGGCAACTGAACCACCTACGGATCGTTTGATGGATCGAGCTCCAGTAGGTAGAAGTGAACCTCTTATAACACACCACATGTGGAGGAATCTGCTTATACAGGCAATATATCAAGTGTCTGTTTTGCTTGTACTGACTTTCCAAGGTAGGACTTTATTGAATCTGAAGCATCACGCTGACGCTACCAAAGTGAAGAACACTTTAATATTCAATGCATTTGTTCTCTGTCAAATTTTTAATGAATTTAATGCACGAAAGCCAGATGAAAGGAACATATTCAAGGGAGTCACAAAAAACTATCTCTTCACGGGGATAGTGGCTTTAACTCTCATACTTCAGATTCTCATCATTGAATTCCTGGGGAAGTTCACATCAACAGTGAGGCTTAATTGGAAGCAGTGGCTCATTTGCGTTATCATTGGAGTTATCAGCTGGCCTCTTGCTTTGATTGGGAAATTCATACCCGTGCCAAGGAGTCGCTGTCACGAGTGGTTTTACAATTGTCTGGGGATGCAGCCAAGAAATCGGAATGGAACCTGA 3219 0.4265 MNLLKNSPRHHSDIEAGSSSHCDYDDAESSSDPFVIPRTKDAPIQRLKRWRQAALVLNASRRFRYTLDLKKEEENRQILGKIRVHAEAIRAAYLFKGAAINGGNEITPPHPRPVGDFGIGNEELLSISRDHKVDVLQQYGGARGLSELLKSSTEKGINGDDADLIKRRNAFGSNNYPRKKGRSFWMFLWDACKDLTLMILMVAAAASLALGIKTEGIKEGWYDGGSIAFAVILVIVVTAISDYKQSLQFQHLNDEKRNIHLEVIRGGRRVEISIYDIVVGDVVPLNIGNQVPADGILITGHSLAIDESSMTGESKTVYKDSKNPFLMSGCKVADGSGTMLVLGVGLNTEWGLLMSSISEDNGEETPLQVRLNGVATFIGIVGLSVAVIVLIVLLARYFSGHTRDANGNVEFKAGKTKIGDAINGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTMNKMTVVKVYSGGKKIGPDSKSELSPNLCNLITEGVAQNTNGSVSMVGGDVEVSGSPTEKAILHWGIKMGMNFEAVRSESSIIHVFPFNSEKKRGGVAVKTSDSQVHIHWKGAAEIVLACCTWYIEATGQLVKMDDKKMAFFQKAIEDMASDSLRCVAMAYRSYEMTSVPTSEEELAHWSLPEDDLILLAIVGLKDPCRPGVREAVQLCQKAGVKVRMVTGDNLETAKSIAIECGILRTSAEAVEPYIIEGKSFRALSDEAREKVAQNLLVMGRSSPNDKLLLVKALRKMGHVVAVTGDGTNDAPALHEADVGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVISAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDRLMDRAPVGRSEPLITHHMWRNLLIQAIYQVSVLLVLTFQGRTLLNLKHHADATKVKNTLIFNAFVLCQIFNEFNARKPDERNIFKGVTKNYLFTGIVALTLILQILIIEFLGKFTSTVRLNWKQWLICVIIGVISWPLALIGKFIPVPRSRCHEWFYNCLGMQPRNRNGT 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1339 1072 FunFam Calcium-transporting ATPase 237 358 - -
Prci4g1339 1072 SFLD C1.7: P-type atpase like 464 839 - -
Prci4g1339 1072 CDD P-type_ATPase_Ca_PMCA-like 166 920 - -
Prci4g1339 1072 FunFam Calcium-transporting ATPase 492 687 - -
Prci4g1339 1072 FunFam Calcium-transporting ATPase 9 plasma membrane-type 336 506 - -
Prci4g1339 1072 Pfam Ca2+-ATPase N terminal autoinhibitory domain 32 74 IPR024750 GO:0005516
Prci4g1339 1072 Pfam Cation transporter/ATPase, N-terminus 141 207 IPR004014 -
Prci4g1339 1072 MobiDBLite consensus disorder prediction 8 28 - -
Prci4g1339 1072 NCBIfam HAD-IC family P-type ATPase 753 867 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci4g1339 1072 NCBIfam HAD-IC family P-type ATPase 422 505 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci4g1339 1072 PRINTS P-type cation-transporting ATPase superfamily signature 306 320 - -
Prci4g1339 1072 PRINTS P-type cation-transporting ATPase superfamily signature 482 496 - -
Prci4g1339 1072 PRINTS P-type cation-transporting ATPase superfamily signature 811 823 - -
Prci4g1339 1072 PRINTS P-type cation-transporting ATPase superfamily signature 702 712 - -
Prci4g1339 1072 PRINTS P-type cation-transporting ATPase superfamily signature 787 806 - -
Prci4g1339 1072 PRINTS P-type cation-transporting ATPase superfamily signature 680 691 - -
Prci4g1339 1072 Gene3D - 479 832 IPR023214 -
Prci4g1339 1072 FunFam Calcium-transporting ATPase 42 98 - -
Prci4g1339 1072 Gene3D - 164 358 - -
Prci4g1339 1072 Gene3D - 492 687 IPR023299 GO:0000166
Prci4g1339 1072 Pfam E1-E2 ATPase 260 460 - -
Prci4g1339 1072 PRINTS Sodium/potassium-transporting ATPase signature 598 616 - -
Prci4g1339 1072 PRINTS Sodium/potassium-transporting ATPase signature 475 496 - -
Prci4g1339 1072 PRINTS Sodium/potassium-transporting ATPase signature 225 245 - -
Prci4g1339 1072 MobiDBLite consensus disorder prediction 1 37 - -
Prci4g1339 1072 FunFam Calcium-transporting ATPase 804 1051 - -
Prci4g1339 1072 Pfam Cation transporting ATPase, C-terminus 872 1047 IPR006068 -
Prci4g1339 1072 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 489 684 IPR023299 GO:0000166
Prci4g1339 1072 Gene3D - 190 1043 - -
Prci4g1339 1072 PANTHER CATION TRANSPORTING ATPASE 96 1049 - -
Prci4g1339 1072 Pfam haloacid dehalogenase-like hydrolase 479 801 - -
Prci4g1339 1072 Gene3D - 44 97 - -
Prci4g1339 1072 SUPERFAMILY Calcium ATPase, transmembrane domain M 140 1049 IPR023298 -
Prci4g1339 1072 SFLD p-type atpase 464 839 IPR044492 -
Prci4g1339 1072 SMART Cation_ATPase_N_a_2 139 212 IPR004014 -
Prci4g1339 1072 FunFam Calcium-transporting ATPase 680 832 - -
Prci4g1339 1072 SUPERFAMILY Calcium ATPase, transduction domain A 260 355 IPR008250 -
Prci4g1339 1072 FunFam Calcium-transporting ATPase 190 247 - -
Prci4g1339 1072 ProSitePatterns E1-E2 ATPases phosphorylation site. 484 490 IPR018303 -
Prci4g1339 1072 NCBIfam calcium-translocating P-type ATPase, PMCA-type 131 1049 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Prci4g1339 1072 SUPERFAMILY HAD-like 480 892 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1339 Prci-Chr4 10817917 10853029 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1339 2 1050 Primary Pumps ATPases AT5G57110 72.917 0.0 1559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1339 K01537 - gmx:100792945 1633.23