Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1337 ATGCTTGTAGACGTTGATAAACATAGCTCAAGAAACTACTTACCTGTGTATTCCTTCTGTGAAGTTTTGGGAACTATGAATCTCTTGAAGAATTCACCTCGTCACCATAGTGACATTGAGGCCGGAAGTAGCAGCCACTGCGATTATGACGACGCAGAAAGTTCGTCTGATCCATTTGTTATTCCAAGAACGAAGGATGCTCCTATTCAACGCCTCAAACGTTGGAGGCAAGCCGCGCTTGTGCTTAATGCTTCTCGTCGGTTCCGTTACACATTGGACTTGAAAAAAGAAGAGGAGAATCGGCAAATATTGGGGAAGATAAGGGTTCATGCAGAAGCAATTAGAGCTGCATATCTTTTCAAAGGTGCTGCTATAAACGGGGGGAATGAAATCACACCTCCTCACCCACGCCCAGTTGGTGACTTTGGTATCGGAAATGAAGAACTTCTTTCAATTTCTAGGGATCATAAAGTTGATGTCCTCCAACAATATGGTGGGGCTAGAGGGCTATCAGAATTGTTGAAATCTAGTACAGAGAAGGGGATTAATGGTGATGATGCAGATCTAATAAAAAGAAGAAATGCTTTTGGTTCAAACAATTATCCTCGAAAGAAAGGAAGGAGTTTTTGGATGTTTTTGTGGGATGCTTGCAAGGATCTGACCTTGATGATATTAATGGTAGCTGCGGCAGCTTCATTAGCACTAGGAATAAAAACTGAGGGTATTAAGGAAGGATGGTATGATGGGGGCAGCATTGCTTTTGCAGTAATTCTTGTTATTGTTGTTACAGCTATAAGCGATTATAAACAGTCTCTTCAGTTTCAACATCTGAATGACGAGAAGAGAAATATACATTTAGAGGTTATAAGAGGTGGTAGAAGGGTTGAGATCTCTATATATGACATCGTTGTTGGTGATGTTGTGCCCCTTAATATCGGTAACCAGGTCCCTGCCGATGGTATCTTGATCACTGGTCACTCTCTTGCTATTGATGAATCAAGTATGACTGGGGAGAGCAAGACTGTCTATAAGGACTCTAAAAACCCTTTTCTGATGTCTGGATGTAAAGTTGCAGATGGCAGTGGCACCATGCTGGTACTCGGTGTTGGTTTAAATACTGAATGGGGGCTTCTGATGTCTAGTATTTCAGAAGACAATGGTGAAGAAACGCCCTTACAGGTACGTTTAAATGGTGTTGCCACTTTCATTGGTATTGTTGGACTCTCTGTTGCTGTTATCGTTTTGATTGTGTTGTTGGCCAGATATTTCTCTGGGCATACTAGAGATGCAAATGGCAATGTTGAATTTAAGGCAGGCAAGACAAAAATTGGTGATGCAATTAATGGGGCAATTAAAATAGTTACAGTTGCGGTGACCATTGTTGTAGTTGCAGTGCCCGAAGGGCTTCCTCTAGCAGTTACCTTAACACTGGCTTACTCAATGAGAAAAATGATGGCGGACAAAGCTTTGGTGAGGAGGCTTTCAGCCTGTGAGACAATGGGCTCTGCAACAACCATTTGTAGTGATAAGACTGGTACATTGACCATGAATAAGATGACTGTGGTTAAGGTGTACAGTGGTGGGAAGAAGATTGGACCTGACAGCAAGTCAGAGCTCTCTCCGAATCTCTGCAATTTGATCACTGAAGGTGTTGCACAGAACACCAATGGCAGTGTCTCTATGGTTGGGGGTGATGTTGAGGTTTCTGGATCACCAACAGAAAAGGCAATTTTACATTGGGGAATTAAGATGGGGATGAATTTTGAGGCTGTCAGATCAGAGTCATCAATTATTCATGTCTTTCCATTTAATTCAGAGAAAAAACGTGGTGGAGTTGCAGTAAAGACGTCTGACTCTCAAGTTCACATACATTGGAAAGGTGCTGCTGAGATAGTCCTAGCCTGTTGTACATGGTATATTGAAGCAACCGGCCAGCTAGTGAAGATGGATGATAAGAAGATGGCATTTTTTCAAAAAGCTATTGAAGATATGGCTTCTGATAGTCTACGTTGTGTTGCCATGGCATATAGATCATATGAAATGACAAGTGTTCCAACTAGTGAAGAAGAACTTGCTCACTGGTCATTACCAGAGGATGATCTCATCTTACTGGCTATTGTTGGTCTGAAGGATCCCTGTCGACCTGGTGTCAGAGAGGCTGTGCAACTTTGCCAAAAAGCTGGAGTTAAGGTACGAATGGTTACTGGTGACAACTTAGAAACTGCAAAATCAATTGCTATAGAGTGTGGAATACTTCGAACATCGGCAGAAGCTGTGGAGCCCTACATCATTGAGGGGAAATCATTTCGTGCATTGTCAGATGAAGCCAGAGAAAAAGTTGCCCAAAATTTATTGGTTATGGGAAGGTCTTCTCCCAATGACAAGCTTCTGCTTGTGAAAGCATTGAGGAAGATGGGGCATGTTGTGGCTGTTACAGGAGATGGAACTAATGATGCTCCCGCCCTACATGAGGCAGATGTAGGTCTTGCAATGGGCATACAAGGGACAGAAGTTGCTAAGGAGAGCTCAGATATCATTATTTTGGACGACAACTTTGCTTCGGTTGTGAAGGTTGTCAGATGGGGGCGGTCTGTATATGCAAACATTCAGAAATTTATCCAGTTCCAACTTACCGTCAATGTTGCAGCTCTGGTTATTAATGTTATTTCTGCAGTTTCCTCTGGCGATGTCCCACTAAATGCAGTACAGCTTCTTTGGGTAAATCTCATCATGGACACACTTGGAGCACTTGCCTTGGCAACTGAACCACCTACGGATCGTTTGATGGATCGAGCTCCAGTAGGTAGAAGTGAACCTCTTATAACACACCACATGTGGAGGAATCTGCTTATACAGGCAATATATCAAGTGTCTGTTTTGCTTGTACTGACTTTCCAAGGTAGGACTTTATTGAATCTGAAGCATCACGCTGACGCTACCAAAGTGAAGAACACTTTAATATTCAATGCATTTGTTCTCTGTCAAATTTTTAATGAATTTAATGCACGAAAGCCAGATGAAAGGAACATATTCAAGGGAGTCACAAAAAACTATCTCTTCACGGGGATAGTGGCTTTAACTCTCATACTTCAGATTCTCATCATTGAATTCCTGGGGAAGTTCACATCAACAGTGAGGCTTAATTGGAAGCAGTGGCTCATTTGCGTTATCATTGGAGTTATCAGCTGGCCTCTTGCTTTGATTGGGAAATTCATACCCGTGCCAAGGAGTCGCTGTCACGAGTGGTTTTACAATTGTCTGGGGATGCAGCCAAGAAATCGGAATGGAACCTGA 3294 0.4253 MLVDVDKHSSRNYLPVYSFCEVLGTMNLLKNSPRHHSDIEAGSSSHCDYDDAESSSDPFVIPRTKDAPIQRLKRWRQAALVLNASRRFRYTLDLKKEEENRQILGKIRVHAEAIRAAYLFKGAAINGGNEITPPHPRPVGDFGIGNEELLSISRDHKVDVLQQYGGARGLSELLKSSTEKGINGDDADLIKRRNAFGSNNYPRKKGRSFWMFLWDACKDLTLMILMVAAAASLALGIKTEGIKEGWYDGGSIAFAVILVIVVTAISDYKQSLQFQHLNDEKRNIHLEVIRGGRRVEISIYDIVVGDVVPLNIGNQVPADGILITGHSLAIDESSMTGESKTVYKDSKNPFLMSGCKVADGSGTMLVLGVGLNTEWGLLMSSISEDNGEETPLQVRLNGVATFIGIVGLSVAVIVLIVLLARYFSGHTRDANGNVEFKAGKTKIGDAINGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTMNKMTVVKVYSGGKKIGPDSKSELSPNLCNLITEGVAQNTNGSVSMVGGDVEVSGSPTEKAILHWGIKMGMNFEAVRSESSIIHVFPFNSEKKRGGVAVKTSDSQVHIHWKGAAEIVLACCTWYIEATGQLVKMDDKKMAFFQKAIEDMASDSLRCVAMAYRSYEMTSVPTSEEELAHWSLPEDDLILLAIVGLKDPCRPGVREAVQLCQKAGVKVRMVTGDNLETAKSIAIECGILRTSAEAVEPYIIEGKSFRALSDEAREKVAQNLLVMGRSSPNDKLLLVKALRKMGHVVAVTGDGTNDAPALHEADVGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVISAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDRLMDRAPVGRSEPLITHHMWRNLLIQAIYQVSVLLVLTFQGRTLLNLKHHADATKVKNTLIFNAFVLCQIFNEFNARKPDERNIFKGVTKNYLFTGIVALTLILQILIIEFLGKFTSTVRLNWKQWLICVIIGVISWPLALIGKFIPVPRSRCHEWFYNCLGMQPRNRNGT 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1337 1097 FunFam Calcium-transporting ATPase 9 plasma membrane-type 361 531 - -
Prci4g1337 1097 SUPERFAMILY HAD-like 505 917 IPR036412 -
Prci4g1337 1097 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 514 709 IPR023299 GO:0000166
Prci4g1337 1097 FunFam Calcium-transporting ATPase 705 857 - -
Prci4g1337 1097 Pfam Cation transporter/ATPase, N-terminus 166 232 IPR004014 -
Prci4g1337 1097 FunFam Calcium-transporting ATPase 517 712 - -
Prci4g1337 1097 Gene3D - 215 1068 - -
Prci4g1337 1097 Gene3D - 504 857 IPR023214 -
Prci4g1337 1097 FunFam Calcium-transporting ATPase 215 272 - -
Prci4g1337 1097 NCBIfam HAD-IC family P-type ATPase 447 530 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci4g1337 1097 NCBIfam HAD-IC family P-type ATPase 778 892 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci4g1337 1097 Gene3D - 517 712 IPR023299 GO:0000166
Prci4g1337 1097 NCBIfam calcium-translocating P-type ATPase, PMCA-type 156 1074 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Prci4g1337 1097 MobiDBLite consensus disorder prediction 36 53 - -
Prci4g1337 1097 ProSitePatterns E1-E2 ATPases phosphorylation site. 509 515 IPR018303 -
Prci4g1337 1097 MobiDBLite consensus disorder prediction 36 57 - -
Prci4g1337 1097 Gene3D - 189 383 - -
Prci4g1337 1097 PRINTS Sodium/potassium-transporting ATPase signature 500 521 - -
Prci4g1337 1097 PRINTS Sodium/potassium-transporting ATPase signature 623 641 - -
Prci4g1337 1097 PRINTS Sodium/potassium-transporting ATPase signature 250 270 - -
Prci4g1337 1097 FunFam Calcium-transporting ATPase 262 383 - -
Prci4g1337 1097 Gene3D - 69 122 - -
Prci4g1337 1097 FunFam Calcium-transporting ATPase 829 1076 - -
Prci4g1337 1097 Pfam Ca2+-ATPase N terminal autoinhibitory domain 57 99 IPR024750 GO:0005516
Prci4g1337 1097 SUPERFAMILY Calcium ATPase, transmembrane domain M 165 1074 IPR023298 -
Prci4g1337 1097 SFLD Haloacid Dehalogenase 489 864 - -
Prci4g1337 1097 Pfam Cation transporting ATPase, C-terminus 897 1072 IPR006068 -
Prci4g1337 1097 SFLD p-type atpase 489 864 IPR044492 -
Prci4g1337 1097 PANTHER CATION TRANSPORTING ATPASE 121 1074 - -
Prci4g1337 1097 PRINTS P-type cation-transporting ATPase superfamily signature 507 521 - -
Prci4g1337 1097 PRINTS P-type cation-transporting ATPase superfamily signature 836 848 - -
Prci4g1337 1097 PRINTS P-type cation-transporting ATPase superfamily signature 705 716 - -
Prci4g1337 1097 PRINTS P-type cation-transporting ATPase superfamily signature 727 737 - -
Prci4g1337 1097 PRINTS P-type cation-transporting ATPase superfamily signature 331 345 - -
Prci4g1337 1097 PRINTS P-type cation-transporting ATPase superfamily signature 812 831 - -
Prci4g1337 1097 Pfam haloacid dehalogenase-like hydrolase 504 826 - -
Prci4g1337 1097 FunFam Calcium-transporting ATPase 67 123 - -
Prci4g1337 1097 SMART Cation_ATPase_N_a_2 164 237 IPR004014 -
Prci4g1337 1097 Pfam E1-E2 ATPase 285 485 - -
Prci4g1337 1097 SUPERFAMILY Calcium ATPase, transduction domain A 285 380 IPR008250 -
Prci4g1337 1097 CDD P-type_ATPase_Ca_PMCA-like 191 945 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1337 Prci-Chr4 10817916 10853029 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1337 27 1075 Primary Pumps ATPases AT5G57110 72.917 0.0 1559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1337 K01537 - gmx:100792945 1633.23