Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1331 ATGGAGAACATCGGCGAAGAGTATAGGCATTACTGGGAAACCAACAGGTTCCTTCAAACCGAAGAGCTCGACAGCTGGGGATGGGACGAGGCCTTCTCCGGTTACTACGATTCCAGCTCGCCGGACGGCGCCGCCTCTTCCGCCGCCTCCAAGAACATTGTCTCCGAGAGAAACCGCCGGAAGAAGCTCAACGAGAGACTCTTCGCTCTCAGAGCCGTCGTCCCCAACATTAGCAAGATGGACAAGGCTTCCATAATTAAGGATGCGATCGATTACATCCAACACTTGCACGAACAGGAGAGGAGTATTGAGGCGGAGATATCGGAGCTTGAATCCGGCAAGCAGATCACGAAGCAGAGCTCGAGCGATATCGATTACGAGCAAGACCTCCCGGTCCTGCTCAGGTCCAAGAAGAAGAAAACAGGGCAGCAGCTTTACGATTCTGCTATCAGTTCAAGAAATTCCCCAGTGGAAGTCCTCGAGCTGAAGGTGACGCACATGGGAGAGAAGACGATCGTGGTGAGTTTGACGTGCAGCAAAAGGACGAACACAATGGTGAAACTGTGCGAAGCGTTCGAATCTCTGAAGCTGAAGATCATTACGGCCAATATAACTTGTTTCTCTGGCAGGCTCGTAAAGACAGTCTTCGTGGAGATTGATAAAAATGGTCGAGAACAAGATTCATGCATATTCATGTTTACACAGAAACCAGATTGGCAAAATACAACTAACAACCACCTCAGACTGAGAGGTATGCGTAGTTGTCACACTACTAACCTATGTTTTGTCGTGTTGCTTTGCCTTTTGCATTTTGTCGTTTCAGGCAGATGA 831 0.491 MENIGEEYRHYWETNRFLQTEELDSWGWDEAFSGYYDSSSPDGAASSAASKNIVSERNRRKKLNERLFALRAVVPNISKMDKASIIKDAIDYIQHLHEQERSIEAEISELESGKQITKQSSSDIDYEQDLPVLLRSKKKKTGQQLYDSAISSRNSPVEVLELKVTHMGEKTIVVSLTCSKRTNTMVKLCEAFESLKLKIITANITCFSGRLVKTVFVEIDKNGREQDSCIFMFTQKPDWQNTTNNHLRLRGMRSCHTTNLCFVVLLCLLHFVVSGR 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1331 276 Gene3D - 44 113 IPR036638 GO:0046983
Prci4g1331 276 SMART finulus 53 102 IPR011598 GO:0046983
Prci4g1331 276 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 46 223 - -
Prci4g1331 276 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 47 96 IPR011598 GO:0046983
Prci4g1331 276 FunFam Basic helix-loop-helix (BHLH) DNA-binding superfamily protein 43 117 - -
Prci4g1331 276 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 112 IPR036638 GO:0046983
Prci4g1331 276 Pfam Helix-loop-helix DNA-binding domain 54 97 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1331 Prci-Chr4 10687960 10693981 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1331 1 219 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 63.514 1.67e-85 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci4g1331 HLH 5.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1331 - - pcin:129308076 531.176