Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1327 ATGTCTGCATGTTTAAGCGGAGCTAGTGGCAGAACCTACGGGTTCGATTTCGATTTTGTCAAATCACCGTCTCCACCGACCCGAACTTCGCATTCATCTTCTCCTTCTTCAACTATCTCGGAATCGAGTGATTCTCCACTTGCTATCTCCACCCGAAAACCCCGAACCCCTCGAAAGCGACCCAACCAAACTTACAACGAAGCTGCTGCAACGCTTTCCAAAGCTTACCCAAATCTATTCCCCTCCGAAAGCCTAAAAAAACCAGGCAAGTTCACCAAAACAACGGATAATTTTGCGGACGAAACTTCAGAATTGTTATTTCCTTTCCAAATATTTGATACGTCCTCTTTCCTACTTCAACACCAACCAATCCAACAGAAGCCCGGTAATTTTCCAGTGGAGCCCAAAGCGGTTAGTCTAACAGAAAAGGCGTGCCAGAGTCCAGGGGAGATTAGCTCACGAGTGAGTACGCAAGAATTCGACGATGATTGCCGAGAAGATTTCGACGCCGAGTCGATGCTCGATGAGGAAATCGGAGAGGGAATCGATAGCATCATGGGAAGCAGGGCCGAACATTCCCTCGGCGCGTCTTGTCACGGCGAACACGTGAATCCCGGGACTACGGATTCAACGAGGTTTAATTTTGGCGGGAAATTCGATTTCCGACTAAGAGCTCTCCGAGGAGTCGATGAAGGGAACTATTGGCGGAATATTCCCGCTGTTGTCCATATGCTTGAAATCTCGCCAGAAATAAAAAAGCCTGCTCCCGCAGCCCCAGTTTCGCCGGAGAAGAAAAAGAAGAAGACGAAGAAGGCAGATAAGCCAACAACCATCGAATCATGGAATCCGGAATTGCCGAAAGAGAGTTCGATTCCGAAGGCGAAATCAAATCCTAGTTTGCTGTTGAAATTGAATTACAACGAGGTTTTGAATGCTTGGTCCGACCGGAGTTCACCGTTCACCGGCGAAAGCCCCGCCTGTGACGTGCCCGGAAATGATAGCGCGGCGCGGCTGGCACAAATAGATCTGCTTTGGGATAGCGGGGAAGGAGTGATAAGAGAAGCCAGCGTGATGCGTTATAAAGAAAAGCGTCGTACCCGCCTTTTCTCTAAGAAGATCAGATATCAAGTTCGAAAAGTCAACGCTGATCAACGGCCCAGAACGCAGGGGAGATTTGCGAGGAGGCCCAATGGGTGCTCTAACGCACAAAGCTCATAA 1218 0.4901 MSACLSGASGRTYGFDFDFVKSPSPPTRTSHSSSPSSTISESSDSPLAISTRKPRTPRKRPNQTYNEAAATLSKAYPNLFPSESLKKPGKFTKTTDNFADETSELLFPFQIFDTSSFLLQHQPIQQKPGNFPVEPKAVSLTEKACQSPGEISSRVSTQEFDDDCREDFDAESMLDEEIGEGIDSIMGSRAEHSLGASCHGEHVNPGTTDSTRFNFGGKFDFRLRALRGVDEGNYWRNIPAVVHMLEISPEIKKPAPAAPVSPEKKKKKTKKADKPTTIESWNPELPKESSIPKAKSNPSLLLKLNYNEVLNAWSDRSSPFTGESPACDVPGNDSAARLAQIDLLWDSGEGVIREASVMRYKEKRRTRLFSKKIRYQVRKVNADQRPRTQGRFARRPNGCSNAQSS 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1327 405 MobiDBLite consensus disorder prediction 253 293 - -
Prci4g1327 405 MobiDBLite consensus disorder prediction 379 405 - -
Prci4g1327 405 Pfam CCT motif 353 395 IPR010402 GO:0005515
Prci4g1327 405 MobiDBLite consensus disorder prediction 23 50 - -
Prci4g1327 405 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 397 - -
Prci4g1327 405 MobiDBLite consensus disorder prediction 19 64 - -
Prci4g1327 405 ProSiteProfiles CCT domain profile. 353 395 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1327 Prci-Chr4 10642762 10648053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1327 299 395 C2C2-CO-like Transcription Factor Family AT1G73870 46.429 3.23e-22 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci4g1327 CCT 6.8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1327 - - qsa:O6P43_022368 424.861