Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1314 ATGGAACCAGGGGTGACCCCACCCACCCTTCCATCACCGTCACCCGACACCGGTGCTGTTATATTTGGTAAGTATCAATTGACAAATTTTCTTGGTCGAGGAAGCTTTGCTAAAGTCTACTGCGGACGATCCTTAGCGGATGGCTCCATCGTTGCAGTGAAGATTATAAACAAACAAACTATTAAAGCTTCAATGGAATCTAGAATTGTTAGCGAGGTCAATGCAATGTGTCGTCTCCACCATCATCCGAATATCCTCAAAATATACGAAGTTATGGCCACGAAGACCAAAATTTATCTCATCATCGAGTATGCAGCTGGTGGCGATCTCTGTTCAGAAATCATATCCAAAGGCCATTTGACAGAGAGATTAGCTCGCCGTCACTTTCAGCAATTAGTGTCTGCTTTATGTTTCTGTCATCAAAACGGTGTCGCTCACCGCGATATCAAGCCTCAAAACCTTCTCTTGGATAAAGATGGCAATTTGAAAGTCTCGGATTTTGGGCTTTCTTCCTTATCAGAAAATCTCAGAGATCATTTACTTAGCACAGCTTGCGGTACTCCTGTTTACACTGCACCTGAAATACTCCAACGGCAAAGCTACAATGGCTCCCTAACTGACGCCTGGTCATGCGGCCTCATACTATATATCATGCTCACCGGATATCTCCCGTTCAATGACTATAACATCCCGATGATGTGCAGGAAGATTAGTATGAGAGATTACCAGTACCCAAAGTGCATTTCGAAGTCGGCACGCCAGGTGATCTACAATCTACTTGAACCAAACCCAATGAAAAGGATGAGCCTAGAATCGCTGTATGAGATACCGTGGTTCAAGAAATCGATGGAACCAGAAATCGAAAGGAGTATGTTGAGATTGGGATGGGATTCGTGTGAGAAATCTGAAGCGGGATTGAATGCTTTTGAGATAATATCGTTGTCTCGGGGTTTGGATTTGGGAGGCTTGTTCGAAATGAGATTGGACAAGATGTTCACATCGAATGCAGAAAAGAACGTGGTAGTGGAGAAAGTGAAGGAGATTGGATTGGGTTTAGGGTTTAAGATTGAAGAAGGCAAGAATGGTTTGATTGGGTTGGGGAAAGGAAAAGTGGCAATAATCGTTGAAGTGTCTGAAATTGTGAAAGATTTGTTGTTGGTGACCATGAAAGTGGATGAAGGTGGTTTGAATTTTGAGAATTACTGGAACGATTGGAAACGTGGACTTGAAAACATTGTTCTTTCTTGGCTCAACGAAGCTCCGTGA 1266 0.4321 MEPGVTPPTLPSPSPDTGAVIFGKYQLTNFLGRGSFAKVYCGRSLADGSIVAVKIINKQTIKASMESRIVSEVNAMCRLHHHPNILKIYEVMATKTKIYLIIEYAAGGDLCSEIISKGHLTERLARRHFQQLVSALCFCHQNGVAHRDIKPQNLLLDKDGNLKVSDFGLSSLSENLRDHLLSTACGTPVYTAPEILQRQSYNGSLTDAWSCGLILYIMLTGYLPFNDYNIPMMCRKISMRDYQYPKCISKSARQVIYNLLEPNPMKRMSLESLYEIPWFKKSMEPEIERSMLRLGWDSCEKSEAGLNAFEIISLSRGLDLGGLFEMRLDKMFTSNAEKNVVVEKVKEIGLGLGFKIEEGKNGLIGLGKGKVAIIVEVSEIVKDLLLVTMKVDEGGLNFENYWNDWKRGLENIVLSWLNEAP 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1314 421 FunFam Maternal embryonic leucine zipper kinase 19 293 - -
Prci4g1314 421 FunFam Non-specific serine/threonine protein kinase 12 106 - -
Prci4g1314 421 CDD CIPK_C 307 409 - -
Prci4g1314 421 Gene3D Kinase associated domain 1, KA1 307 414 - -
Prci4g1314 421 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 21 360 - -
Prci4g1314 421 ProSiteProfiles Protein kinase domain profile. 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1314 421 SUPERFAMILY Protein kinase-like (PK-like) 21 298 IPR011009 -
Prci4g1314 421 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Prci4g1314 421 Pfam Protein kinase domain 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1314 421 Gene3D Transferase(Phosphotransferase) domain 1 16 306 - -
Prci4g1314 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Prci4g1314 421 SMART serkin_6 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1314 421 CDD STKc_AMPK-like 24 278 - -
Prci4g1314 421 Pfam NAF domain 306 357 IPR004041 GO:0007165
Prci4g1314 421 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1314 Prci-Chr4 10543933 10545396 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1314 8 418 CBL-interacting serine-threonine protein kinases AT4G14580 52.482 2.00e-144 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Prci4g1314 Pkinase 2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1314 K12761 - qsa:O6P43_003294 488.034