Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1312 ATGGCTCGGGACGGGAGCGTTGTGCCGGCCGACCCGCAGGCTCTGGTGGCTGTGAAGAAGAAAACGCAGTCATCAAGGAGTTGGATTCTTTTCGATTCCACAGGTCAGGGCTCCATTCTCGACGTCGACAAGTATGCCATCATGCATCGAGTTCAGATTCATGCTCGTGATCTTCGGATTCTCGATCCTCTACTCTCCTACCCGTCTACGATACTGGGTCGAGAAAAAGCTATTGTTCTTAACTTGGAGCATGTCAAAGCAATTATTACTGCTGAAGAGGTTTTGCTGAGAGATCCAACAGATGAAAATGTGGTCCCTGTTGTTGAGGAACTTCAAAGACGATTGCCTGATGCAAGTTCCAATAATGTCCAAAGAGGAGAACGTAAGGAGTATTCTGCTGGACAGTTTGACATTGAAGCAGCTGAGGAAGATGAGTCACCCTTTGAATTCCGTGCCCTGGAGGTGGCTTTAGAGGCCATTTGTAGTTTCCTTGCAGCACGTACAACAGAATTGGAGATGGCTGCTTATCCTGCATTGGATGAACTTACCTCCAAGATTAGTAGTCGTAATTTGGACAGGGTTCGTAAACTAAAAAGTGCAATGACTAGACTGACTGCTAGGGTTCAAAAGGTTAGAGATGAACTTGAACAATTACTGGATGACGATGATGACATGGCTGACCTATACTTGTCAAGAAAGCTAGGCTCATCTTCCCCAGTTAGTGGATCAGGTGTTGCCAATTGGTTTCCTGCCTCCCCCACCATTGGATCTAAGATATCCAGAGTGAGTAGGGCAAGTGTGGCAACAATGCGTGGTGATGAAAATAATGTGGAGGAACTTGAAATGTTGCTGGAGGCATACTTCATGCAAATTGATGGAACATTGAACAAATTATCCACGCTCCGGGAGTACATTGACGATACAGAAGATTATATCAATATTCAGCTTGACAACCATCGAAATCAGCTAATCCAGTTAGAACTGTTTCTGAGTTCAGGAACTGTCTGTCTGTCTGTCTATTCTTTGGTGGCTGCAATATTTGGCATGAATATCCCATACACGTGGAATCACCAACATGGTTACATGTTCAAATGGGTAGTTATTGTTACGGGCTTATTCTGTGCAATTATGTTTGTCTGTATAATTGCCTATGCTCGTAAAAAGGGGTTAGTAGGATCGTGA 1182 0.4442 MARDGSVVPADPQALVAVKKKTQSSRSWILFDSTGQGSILDVDKYAIMHRVQIHARDLRILDPLLSYPSTILGREKAIVLNLEHVKAIITAEEVLLRDPTDENVVPVVEELQRRLPDASSNNVQRGERKEYSAGQFDIEAAEEDESPFEFRALEVALEAICSFLAARTTELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKLGSSSPVSGSGVANWFPASPTIGSKISRVSRASVATMRGDENNVEELEMLLEAYFMQIDGTLNKLSTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSVYSLVAAIFGMNIPYTWNHQHGYMFKWVVIVTGLFCAIMFVCIIAYARKKGLVGS 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1312 393 Pfam CorA-like Mg2+ transporter protein 275 381 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Prci4g1312 393 Gene3D - 13 99 - -
Prci4g1312 393 Gene3D Magnesium transport protein CorA, transmembrane region 103 323 - -
Prci4g1312 393 Coils Coil 194 221 - -
Prci4g1312 393 CDD Mrs2_Mfm1p-like 28 390 IPR039204 -
Prci4g1312 393 Gene3D Magnesium transport protein CorA, transmembrane region 330 389 - -
Prci4g1312 393 FunFam Magnesium transporter MRS2-1 16 99 - -
Prci4g1312 393 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 329 380 IPR045863 -
Prci4g1312 393 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 17 391 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1312 Prci-Chr4 10506434 10513675 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1312 1 366 MRS2 Gene Family AT5G64560 80.163 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1312 K16075 - qsa:O6P43_021490 634.409