LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci4g1304	ATGGACTTGGAACCCGAAGGAGCTGAGGATTCAAAGATGAAGGGTGTTGGAAATCAGAGCAGTAAAGATATGATATTTAGAGCTGATATGATTGATCTGAAAAGTTTGGATGTTCAGTTAGAAAAGCATTTAAGCAAAGTTTGGTCAAGGAAATCAGAGTCGGACAGGCCTAAAGAAGAATGGGAGATTGATTTGGCCAAATTGGATATCCGATATGCTTTTGCTCATGGGGCCTATGGTACTGTCTATAGGGGCACCTATGATAACCAAGAAGTTGCAGTGAAAGTATTGAACTGGGGTGAGGATGGTATCGCTACAGCAGCTGAAACCGCTGCTTTACGTGCATCCTTTCAGCAGGAGGTTGCTGTCTGGCACAAACTTGACCATCCAAATGTCACAAAATTTATCGGAGCATCGATGGGAACTTCAAATCTTAAGGTCCCGGCGGATAGCTCTTCAACTAATGGGGAAAATCCTCTTCCATCCAGGGCATGTTGTGTTGTTGTTGAGTATCTTCCTGGTGGGACATTAAAACAATTCTTAATTAGAAATAGGCGGAAGAAACTTGCTTTTAAGGTCGTGATCCAGCTGGCTTTGGACCTTTCTAGAGGACTTAGCTATCTACACTCGAAGAGGATTGTACATCGTGATGTCAAAACAGAAAACATGTTGCTGGATGGACTTGCACATCTGAAAATAGCTGATTTTGGAGTTGCTCGTGTTGAAGCTCTAAATCCGAGTGACATGACAGGCGAAACTGGAACCCTTGGTTACATGGCACCAGAGGTTCTGGAGGGCAAGCCTTACAACCATAGATGTGATGTCTACAGCTTCGGCATCTGCTTGTGGGAAATTTATTGCTGTGACATGCCCTATCCAGATCTTAGCTTTGCTGATGTGTCATCCGCAGTTGTTCGTCAGAATCTAAGGCCAGAGATTCCAAGATGCTGTCCAAGCTCATTTGCAAATATAATGAGGAAGTGCTGGGATGGGAATCCAAACAAGCGTCCAGAGATGGCAGATGTGGTGAGGATGCTTGAAGCAGTTGATACCAGCAAAGGAGGAGGAATGATACCCGAAGATCATAATCCAAACTGCTTCTGTTTTGCACCTACGCGTGGTCCCTGA	1128	0.445	MDLEPEGAEDSKMKGVGNQSSKDMIFRADMIDLKSLDVQLEKHLSKVWSRKSESDRPKEEWEIDLAKLDIRYAFAHGAYGTVYRGTYDNQEVAVKVLNWGEDGIATAAETAALRASFQQEVAVWHKLDHPNVTKFIGASMGTSNLKVPADSSSTNGENPLPSRACCVVVEYLPGGTLKQFLIRNRRKKLAFKVVIQLALDLSRGLSYLHSKRIVHRDVKTENMLLDGLAHLKIADFGVARVEALNPSDMTGETGTLGYMAPEVLEGKPYNHRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSFANIMRKCWDGNPNKRPEMADVVRMLEAVDTSKGGGMIPEDHNPNCFCFAPTRGP	375

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci4g1304	375	PANTHER	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	55	349	-	-
	Prci4g1304	375	ProSiteProfiles	Protein kinase domain profile.	68	349	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci4g1304	375	PRINTS	Tyrosine kinase catalytic domain signature	273	295	IPR001245	GO:0004672\|GO:0006468
	Prci4g1304	375	PRINTS	Tyrosine kinase catalytic domain signature	317	339	IPR001245	GO:0004672\|GO:0006468
	Prci4g1304	375	PRINTS	Tyrosine kinase catalytic domain signature	169	182	IPR001245	GO:0004672\|GO:0006468
	Prci4g1304	375	PRINTS	Tyrosine kinase catalytic domain signature	207	225	IPR001245	GO:0004672\|GO:0006468
	Prci4g1304	375	Gene3D	Phosphorylase Kinase; domain 1	57	148	-	-
	Prci4g1304	375	Gene3D	Transferase(Phosphotransferase) domain 1	174	357	-	-
	Prci4g1304	375	Pfam	Protein tyrosine and serine/threonine kinase	73	346	IPR001245	GO:0004672\|GO:0006468
	Prci4g1304	375	CDD	STKc_MAP3K-like	75	346	-	-
	Prci4g1304	375	FunFam	Kinase suppressor of Ras 1	57	151	-	-
	Prci4g1304	375	SMART	serkin_6	68	349	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci4g1304	375	SUPERFAMILY	Protein kinase-like (PK-like)	52	346	IPR011009	-
	Prci4g1304	375	FunFam	Serine/threonine-protein kinase HT1	172	357	-	-
	Prci4g1304	375	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	213	225	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci4g1304	Prci-Chr4	10469487	10473661	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci4g1304	17	375	MAP Kinase Kinase Kinase	AT3G22750	79.167	0.0	608

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-4	Prci4g1304		PK_Tyr_Ser-Thr	5.8e-58	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci4g1304	-		-	tcc:18603033	635.18