Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1300 ATGGGTTTGACATCTATGTTTAGGAGTTGCTTCAAGGCGGAGGGTCGGGTTGCGGTGCCGGCGTCGAAGGCTAAGGTGGTGGCGACGAAGCAGAGTTCGTACCCCTGGGTTTCAGTGTCGGATTTGAGCAATCCGATAAGCGGCACGCTGTCGGAGGATCTGTCGGTGTCGCTTGCCGGATCGAATCTGTATGTGTTTACGCTGGCGGAGATGAAGCTGATCACGCAGGGATTCTCCTCCGGTAACTTTCTCGGAGAAGGCGGCTTTGGACCGGTGCACAAGGGCTTCATAGACGACAAGCTCCGGCCGGGTCTTAAGGCCCAGACTGTCGCCGTCAAGCTCTTGAACCTGGACGGCTCTCAGGGCCACAAGGAGTGGTTGACTGAAGTTGTTTTTCTGGGACAACTAAGACACTCCCACCTGGTGAAGCTGATCGGATATTGCTGCGAAGAAGAACACAGGCTTCTGGTATATGAGTATCTTCCTAGAGGCAGCCTAGAAAATCAACTCTTCAGAAGATACTCAGTATCACTGCCATGGTCAACCAGAATGAAAATCGCCGTCGGAGCCGCCAAGGGTCTTGCCTTTCTTCATGAAGCTGCTAAACCCGTTATCTACAGAGATTTCAAAGCCTCAAACATCTTACTAGACTCAGATTACAATGCGAAGCTGTCTGATTTCGGGTTGGCGAAAGATGGCCCTGAAGGAGACGACACACACGTGTCGACCCGAGTGATGGGAACTCAGGGCTACGCGGCGCCTGAGTACGTCATGACGGGTCACTTGACATCCAAGAGTGACGTGTACAGTTTCGGGGTGGTTCTGTTAGAGCTTCTAACAGGACGAAGATCAGTAGACAAAACCAGGCAAGGAAGAGAGCAGAACTTAGTAGAATGGGCGAGGCCAATGCTTTACGATACGAGGAAGCTTGGCAGAATCATGGACTCGAGACTTGAAGGTCAATACTCTGAGATGGGTGCGGCCAAGGCTGCTGCATTGGCTCACCAGTGCTTGAGCCACCGGCCCAAGAACAGACCCACCATGAGCCAGGTGGTCAAGACCCTCGAGCCACTTCAGGACTTCGACGACGTCCCTATCACACCGTTTGTCTACACTGTTCCCGCCAATGAACCCAATGACTCGAGGGACTGTGCTGAGCCGCCCAGGGAGAGAAAGAATCATCATCGTCATCACAGACACCACCCTCTGAGATCGCCCAGGTCGCCGCCGGATAATAATAAATCTGCAAATTCTTCACAGTCTCGCTATGGAAGCTCGAGTGGAAGCGGATCCAACTCACCTACTTCGCGTCATCACAAGGCCAAAGGAGCTTGA 1335 0.5288 MGLTSMFRSCFKAEGRVAVPASKAKVVATKQSSYPWVSVSDLSNPISGTLSEDLSVSLAGSNLYVFTLAEMKLITQGFSSGNFLGEGGFGPVHKGFIDDKLRPGLKAQTVAVKLLNLDGSQGHKEWLTEVVFLGQLRHSHLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFRRYSVSLPWSTRMKIAVGAAKGLAFLHEAAKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSKSDVYSFGVVLLELLTGRRSVDKTRQGREQNLVEWARPMLYDTRKLGRIMDSRLEGQYSEMGAAKAAALAHQCLSHRPKNRPTMSQVVKTLEPLQDFDDVPITPFVYTVPANEPNDSRDCAEPPRERKNHHRHHRHHPLRSPRSPPDNNKSANSSQSRYGSSSGSGSNSPTSRHHKAKGA 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1300 444 Gene3D Transferase(Phosphotransferase) domain 1 161 365 - -
Prci4g1300 444 MobiDBLite consensus disorder prediction 372 444 - -
Prci4g1300 444 FunFam Serine/threonine-protein kinase BIK1 45 160 - -
Prci4g1300 444 ProSiteProfiles Protein kinase domain profile. 78 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1300 444 FunFam Probable serine/threonine-protein kinase PBL8 161 371 - -
Prci4g1300 444 Pfam Protein tyrosine and serine/threonine kinase 81 355 IPR001245 GO:0004672|GO:0006468
Prci4g1300 444 PANTHER OS01G0588500 PROTEIN-RELATED 57 359 - -
Prci4g1300 444 Gene3D Phosphorylase Kinase; domain 1 46 160 - -
Prci4g1300 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Prci4g1300 444 MobiDBLite consensus disorder prediction 408 438 - -
Prci4g1300 444 SUPERFAMILY Protein kinase-like (PK-like) 55 356 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1300 Prci-Chr4 10341967 10344474 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1300 66 355 Glycoside Hydrolase AT3G07070 53.242 2.67e-99 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci4g1300 PK_Tyr_Ser-Thr 9.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1300 - - gmx:100783759 628.632