Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1283 ATGGAGGAAATATCTTCGGCGGTTGCAGTGCCTTTTAGTCTTGGGAATTTAATCCCTGGCGACTCATCAGTGGCAACACACATGGATATTGCTGGATTCAAATTTATGGTTACAGTATCTGCAGGGGAGGAGGATCAGGTAGGTGCTTCGCTTGGACCAGAAATGTTAATTAATTGTAACGGAAACTGGTTCTCAGATGAAACCCATAATCAGGGAGGGAAGGAAGATGAATGCAGGTTAGGGGTTAATATTCAATGTCTGCACGATTCAAGGTCTCAATCTGTGGCTCACAACAATTGCAGTATCCTTGGGGAGGAATCTTCAGCTTCAGATATTGATTTACCCAATAATATGGACGTTGAAGATAATGCCCATGGTATGTCCAGCTTTAACAATTCATGTACTGTGCTGGAGCCAGTGCAAGACATTGTTTCTGTTCCGACGGATCCTGAGAGTGAAGATGGCAGTGGGTCGGATGGGTCTGATCCAAAACTAGTTGCTCCACCTCTTGAGGTGCCAATGGAGGAAAAAATGTGGAGACCAGGCTTCCAGAAGGCTTTGGATTTGAATACTGGACCTTTTTGGGGCTTTTCGTCGATTTGTGGAAGGAGAAAGGAGATGGAGGATGCTATTGCAGTGAATCCTCATCTTTCGCAAGTTCCTTCACATATGCTAATGGATAATACTGGGAATGAAAACACTGAAAATTTAGATGCCCACTTTTTTGCTGTCTATGATGGACATGGAGGCTGTCAGGTTGCTAATTATTGCCAGGAGCGTCTTCATTCAGTGCTTGTTGAGGAGATACAAGCTGCAGACTCAAGTTTGGATGGAAGTAGTTGGATGGACCATTGGAAAGAAGCATTCACCGGTTGTTTTCAGAAAGTTGATGATGAAGTTGGAGGAATACATCCTGAGAACAATGGAAACAATAACGATGGATCAGAATCCAGTATTGAAGCATTTGCTCCTGAAACTGTTGGTTCTACTGCAGTGGTTGTCATTTTATGTCAAAACCACTTAATAGTTGCAAACTGTGGGGATTCAAGAGCAGTCTTGTGTCGTGGAAAAGAAGCGCTGCCACTATCTTCTGATCACAAACCAAATAGAGAGGATGAATGGGCCCGGATAGAAGCTGCAGGAGGAAGGATCATACAGTGGAATGGGTACCGGGTACTTGGTGTCTTGGCAGTGTCAAGGTCCATAGAATTGGATGATTCTCTCATGAAAGCTATCAATGGGAAAATAACAAGTACAACAACAATATTACCATACCAAAGTGATAGGTACTTAAAGCCATGGATAATTCCTACACCAGAAGTCAAGTTTGTTCGTCGGGAGAAGAAGGATGAGTGCCTCATTCTGGCAAGTGATGGTTTATGGGATGTCATGACAAATGAAGAAGCCTGCGAGATTGCACGAAAACGAATCCTTCTTTGGCACAAGAAGCATGGCAATGGCGGATCGACGTGGCCGGGCAAGGGTGAGGGAGTTGATCCTGCGGCGCAGCATGCTGCAGAGTACTTATCTAGAGTTGCCCTCCAAAGGGGAAGCAAAGATAACATTTCTGTCATAGTGATAGACTTGAAGGGTCAAAGAAAATTTAAGACCAAGGCATGA 1620 0.4414 MEEISSAVAVPFSLGNLIPGDSSVATHMDIAGFKFMVTVSAGEEDQVGASLGPEMLINCNGNWFSDETHNQGGKEDECRLGVNIQCLHDSRSQSVAHNNCSILGEESSASDIDLPNNMDVEDNAHGMSSFNNSCTVLEPVQDIVSVPTDPESEDGSGSDGSDPKLVAPPLEVPMEEKMWRPGFQKALDLNTGPFWGFSSICGRRKEMEDAIAVNPHLSQVPSHMLMDNTGNENTENLDAHFFAVYDGHGGCQVANYCQERLHSVLVEEIQAADSSLDGSSWMDHWKEAFTGCFQKVDDEVGGIHPENNGNNNDGSESSIEAFAPETVGSTAVVVILCQNHLIVANCGDSRAVLCRGKEALPLSSDHKPNREDEWARIEAAGGRIIQWNGYRVLGVLAVSRSIELDDSLMKAINGKITSTTTILPYQSDRYLKPWIIPTPEVKFVRREKKDECLILASDGLWDVMTNEEACEIARKRILLWHKKHGNGGSTWPGKGEGVDPAAQHAAEYLSRVALQRGSKDNISVIVIDLKGQRKFKTKA 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1283 539 SUPERFAMILY PP2C-like 192 531 IPR036457 -
Prci4g1283 539 ProSitePatterns PPM-type phosphatase domain signature. 241 249 IPR000222 GO:0043169
Prci4g1283 539 SMART PP2C_4 184 527 IPR001932 -
Prci4g1283 539 Pfam Protein phosphatase 2C 196 522 IPR001932 -
Prci4g1283 539 CDD PP2Cc 196 529 IPR001932 -
Prci4g1283 539 Gene3D - 184 539 IPR036457 -
Prci4g1283 539 PANTHER PROTEIN PHOSPHATASE 145 529 IPR015655 GO:0004722|GO:0006470
Prci4g1283 539 ProSiteProfiles PPM-type phosphatase domain profile. 194 529 IPR001932 -
Prci4g1283 539 FunFam Protein phosphatase 2C 51 188 537 - -
Prci4g1283 539 MobiDBLite consensus disorder prediction 145 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1283 Prci-Chr4 10220788 10224465 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1283 171 538 PP2C-type Phosphatase Gene Family AT4G26080 52.941 1.04e-127 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1283 K14497 - gmx:100802159 598.201