Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1282 ATGAAGAAAGCTAGCTTGGGCCTCAATCTCAAGCTCAATGTTCCGCAATCTGAGCAGGTTTCCTTCGCCAAGTTTCTGACTGAAAGCGGGACGTTTAAGGATGGGGATCTGCTCGTCAATCGGGATGGAGTTCGGATTGTGACTGAGAGTGAAGTCGAAGCTGCACCTCCCATCAGACCAATAGACGACCAGTTAAGTTTGGCAGACATCGACATAATCAAAGTGGTTGGCAAAGGAAATGGTGGGGTAGTGCAACTGGTGCAACACAAATGGACTAATCAGTTTTTTGCACTAAAGGTTATCCAAATGAATATTGAGGAATCCATGCGAAGGCAGATAGCACAAGAACTTAAAATCAATCAGTCAGCTCAATGTCCGTATGTTGTTATTTGCTATCAGTCATTCTATGAAAACGGTGTCATATCAATCATCTTAGAGTACATGGATGGAGGTTCTTTAGCAGATCTTCTGAAGAAAGTTAAAATGATTCCGGAAAAATATCTTGCTGCTATCTGTAAGCAGGTGCTTGAGGGTTTGATATATCTTCACCATGAAAAACATATTATCCACAGGGACTTAAAACCTTCTAATCTGTTAATAAACCACCGAGGGGAGGTAAAGATCACCGACTTCGGCGTGAGTGTAATAATGCAAACTACATCTGGTCAAGCAAATACTTTCATCGGCACATACAACTATATGTCTCCAGAGAGAATCAATGGAAGCCAGAATGGATACAACTACAAAAGTGACATATGGAGTTTGGGACTGTTATTGCTCGAGTGTGCTACTGGGAGGTTTCCATATACACCACCAGATCAAGGTGAAAGATGGGAAAGTATTTTTGAGCTAATTGAAACAGTTGTTGATAAACCTCCTCCCTCTGCTCCAACTGATCAATTTTCTCCAGAATTCTGCTCGTTTGTCTCAGCATGTTTACAGAAAGACCCAAAAAATAGACCGTCAGCTCAGGATCTTATGGGACATCCTTTTGTCAACATATACGGGGACTCGGATGTAGATCTTTCAGCTTATTTCAAGAATGCAGGATCCCCACTTGCAACTGTACCTACTTCTACTTGA 1083 0.4183 MKKASLGLNLKLNVPQSEQVSFAKFLTESGTFKDGDLLVNRDGVRIVTESEVEAAPPIRPIDDQLSLADIDIIKVVGKGNGGVVQLVQHKWTNQFFALKVIQMNIEESMRRQIAQELKINQSAQCPYVVICYQSFYENGVISIILEYMDGGSLADLLKKVKMIPEKYLAAICKQVLEGLIYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSVIMQTTSGQANTFIGTYNYMSPERINGSQNGYNYKSDIWSLGLLLLECATGRFPYTPPDQGERWESIFELIETVVDKPPPSAPTDQFSPEFCSFVSACLQKDPKNRPSAQDLMGHPFVNIYGDSDVDLSAYFKNAGSPLATVPTST 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1282 360 Pfam Protein kinase domain 72 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1282 360 FunFam Mitogen-activated protein kinase kinase 6 151 351 - -
Prci4g1282 360 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 14 334 - -
Prci4g1282 360 SUPERFAMILY Protein kinase-like (PK-like) 67 336 IPR011009 -
Prci4g1282 360 Gene3D Phosphorylase Kinase; domain 1 48 149 - -
Prci4g1282 360 ProSiteProfiles Protein kinase domain profile. 70 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1282 360 CDD PKc_MAPKK_plant_like 85 333 - -
Prci4g1282 360 FunFam Mitogen-activated protein kinase kinase 6 40 149 - -
Prci4g1282 360 SMART serkin_6 70 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1282 360 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Prci4g1282 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Prci4g1282 360 Gene3D Transferase(Phosphotransferase) domain 1 150 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1282 Prci-Chr4 10213504 10219616 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1282 1 327 MAP Kinase Kinase Gene Family AT4G29810 67.560 1.30e-173 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Prci4g1282 Pkinase 6.8e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1282 K20603 - gmx:100789734 615.15