Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1277 ATGCTTACGTGCATAGCTCGTCCCAAGAAACCGGGAAATGACTCGCTGAGTCAGCCCGATGATTCCGATTCTAAAAACCAAGCCATCAAGTCTCTTACTTCTCAGCTAAAGGATATGGCGTTGAAAGCATCGGGCGCGTACAAGCATTGCAGCCCGTGCACGGGGCCGCCCACGCAGACTCGACTCAGGAGCAATATCGAGTCAGATACGGATTCAGACCGATTCCGGTGGTCGTACCGGAGAACAGGGAGCTCGAGCTCGACGACGACGAGGACATGGGGGAAGGAGATGGAAGCGAGGCTCAAGGGGATTTCTAGTGGAGAAGGGACGCCGAATTCGTCCAGTGGACGGCGAGTGGACCCGGTGGTGTTGTTCGTGGAAGAGAACGAACCCAAAGAGTGGGTGGCGCAGGTGGAGCCCGGCGTTCTGATCACATTTGTTTCACTTCCGCGTGGCGGGAATGATCTGAAGCGAATACGATTCAGCCGCGAGATGTTTAACAAATGGCAAGCTCAAAGATGGTGGGCGGAGAACTATGACAAAGTTATGGAACTTTACAACGTTCGAAGGTTTAACCGCCAAGCTTTCCCTCTTCCAACGCCACCAAGATCCGAAGATGAGAGCTCAAAGATTGAATCAGCAGAAGACAGCCCAGTAACACCTCCACTAACTAGGGAAAGGTTACCTCGTAACTTGTACCGTCCTGCAGGGATGGGAATGGGATACTCATCCTCTGATTCCTTTGATCATCAGTCAATGCAATCCCGGCATCACTATGACTCTAATGGCATGAACTCAACTCCTAAAGTTTCCACCATTAGCGCAGCCAAGACAGAAATATCATCAATGGACGCCTCCATGAGAAGTAGCTCATCCAGAGAAGCTGATCGCTCCGGGGATCTTTCAATCAGCAATGCTAGCGATCTTGAGACTGAATGGGTTGAGCAGGATGAACCTGGGGTTTATATTACCATCAGAGCATTGCCGGGTGGCAAAAGGGAGCTCAGAAGAGTCAGATTCAGCCGAGAAAAGTTTGGGGAGATGCATGCTAGATTATGGTGGGAAGAGAACCGTGCCAGAATACATGAACAATACTTGTAA 1101 0.5068 MLTCIARPKKPGNDSLSQPDDSDSKNQAIKSLTSQLKDMALKASGAYKHCSPCTGPPTQTRLRSNIESDTDSDRFRWSYRRTGSSSSTTTRTWGKEMEARLKGISSGEGTPNSSSGRRVDPVVLFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVRRFNRQAFPLPTPPRSEDESSKIESAEDSPVTPPLTRERLPRNLYRPAGMGMGYSSSDSFDHQSMQSRHHYDSNGMNSTPKVSTISAAKTEISSMDASMRSSSSREADRSGDLSISNASDLETEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHARLWWEENRARIHEQYL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1277 366 MobiDBLite consensus disorder prediction 197 225 - -
Prci4g1277 366 Pfam Transcription factor regulating root and shoot growth via Pin3 310 365 IPR013591 -
Prci4g1277 366 Pfam Transcription factor regulating root and shoot growth via Pin3 132 186 IPR013591 -
Prci4g1277 366 Pfam Transcription factor BRX N-terminal domain 27 53 IPR027988 -
Prci4g1277 366 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 366 IPR044532 -
Prci4g1277 366 MobiDBLite consensus disorder prediction 281 303 - -
Prci4g1277 366 MobiDBLite consensus disorder prediction 1 28 - -
Prci4g1277 366 MobiDBLite consensus disorder prediction 47 69 - -
Prci4g1277 366 MobiDBLite consensus disorder prediction 246 268 - -
Prci4g1277 366 ProSiteProfiles BRX domain profile. 132 187 IPR013591 -
Prci4g1277 366 ProSiteProfiles BRX domain profile. 311 366 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1277 Prci-Chr4 10191996 10198633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1277 1 366 Major Intrinsic Protein MIP AT1G31880 45.195 6.77e-93 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1277 - - gmx:100794109 633.639