Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1267 ATGGGAAGGAAGCCGTGTTGTGATAAAGAAGGTGTAAACAGAGGAAGTTGGTCTGTCATGGAAGATCAAATCCTTGCCAACTTCATTAAAGTCCACGGAGAAGGAAAATGGAGGGACGTTCCAAAACGAGCAGGGCTGAATCGATGCGGAAAGAGTTGCAGACTTCGATGGCTGAACTATCTCAGGCCCGATATCAAGAGAGGAAACTTCTCCGAAGATGAAGAAGACCTCATTATTAGACTCCACAAGCTCCTCGGCAACAGGTGGTCGCTAATTGCAGGAAGATTGCCAGGAAGAACAGACAATGAGATCAAGAACTTCTGGAACACGAATCTAAGCAAGAGGGTCCCTCAAACGAATTACCCCCACAGCATCATCAAACCCTCAGATCCAGCCACATCAGCACCTCCAACATCTACTCATCAACACACAAAATCCTCGTCCTTTCATGCTTGTTTTCCTGCAGAATCTTCTTCCCAACCCAACCTTGTGATTCGAGCAAAACCAACGAGATTTATCAAGAAACCCATCTTGCCCAAATCCAATGCAGAGTGCTTGGAAACCCAGAATACTACGACTGGTTCCGCACAGGATAAAAAAAATGATTGTTTCTCTTCGTATGGTTTGCTTGAAGATTTTGACGTGGATGGCTTGTTCATACCAGAGGTGCCACAAGGGCCATGCACGAGATGCTTCAAGAACAAGATGGAGAACACTGATGATGACGAAATGAATGAATTAGAATGCTGTGACTGTGAGAATCTTAGGGAAGATGTTGGAGCTGATCAAGCCGGCGTGGCCGATGACTCCATAGGGCAACCGCATCTTACAACTCAGAATTGGATTGTCGGGCAATTCTTTGAATCAGCAGATGATGACGTGGATTTCTCTTTTTTAAATCTACTAAGTGATGACTGA 918 0.451 MGRKPCCDKEGVNRGSWSVMEDQILANFIKVHGEGKWRDVPKRAGLNRCGKSCRLRWLNYLRPDIKRGNFSEDEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNFWNTNLSKRVPQTNYPHSIIKPSDPATSAPPTSTHQHTKSSSFHACFPAESSSQPNLVIRAKPTRFIKKPILPKSNAECLETQNTTTGSAQDKKNDCFSSYGLLEDFDVDGLFIPEVPQGPCTRCFKNKMENTDDDEMNELECCDCENLREDVGADQAGVADDSIGQPHLTTQNWIVGQFFESADDDVDFSFLNLLSDD 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1267 305 CDD SANT 69 112 IPR001005 -
Prci4g1267 305 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Prci4g1267 305 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Prci4g1267 305 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Prci4g1267 305 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Prci4g1267 305 FunFam Transcription factor RAX3 7 82 - -
Prci4g1267 305 CDD SANT 16 61 IPR001005 -
Prci4g1267 305 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Prci4g1267 305 Gene3D - 14 66 - -
Prci4g1267 305 MobiDBLite consensus disorder prediction 124 147 - -
Prci4g1267 305 SMART sant 13 63 IPR001005 -
Prci4g1267 305 SMART sant 66 114 IPR001005 -
Prci4g1267 305 Gene3D - 68 135 - -
Prci4g1267 305 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Prci4g1267 305 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 228 - -
Prci4g1267 305 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1267 Prci-Chr4 10100057 10103099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1267 5 141 MYB Transcription Factor Family AT3G13540 59.868 4.37e-60 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci4g1267 Myb_DNA-binding 1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1267 K09422 - csin:114289657 237.269