Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1260 ATGTCAAGTAAGAAGAATCCCCACGGGCTCTGCCGATATTACTCACTGAAACTGACTCTTTCTTTCACAGCACTGTCAATTTTGTTTTCGTCTTCCTCACTCTCACTCTGGTTGATGATGAACGGCGGAAAGAACAGGTTCCCTTTTACTCCATCACAGTGGCAAGAGCTCGAACATCAAGCCCTTATTTTCAAGTACATGGCTTCAGGCATTCCCATTCCTCCTGATCTTGTCTTCTCCATCAAAAGGGCCTCTCTTAACTCTCCTCTTTCTTCAAGGCTCTTGTCCCTCCCACCTCAACACTTTGGGTGGAACTATTTGGAGATGGGTTTGGGAAGAAAGATAGACACGGAACCAGGAAGGTGCAGGAGAACAGATGGGAAGAAATGGAGATGTTCCAAAGAAGCTTACCCAAATTCCAAGTACTGTGAGAGACACATGCACAGAGGAAATAACCGTTTGAGAAAACCTCTGCAGCAACAGCAACAAGGCTTTAGAACAACGTTAACCTCACCAACTAACCATACAAATTCCTCAACAGTCACGAAAAGCAACATTCCTCCTCCTTCACTCTCCCTCACCACTCATTCCTCATCTCTCACACCTCTCTCTGATGCCACCCACAATCATTCCTTCCTCTATAATCATCAGCATCCTTCAAGGTCGTCTTCATCATCGGCTTTTGGCTTCTCTTTACAAGATGATTGTGCCTCTCACTTTAGGAATAGTGGTTATGTTTATGATGGACTGAAAGAAGAGGTAGACGAGCATGCTTTCTTCAAAGAGCCTTCTGGGACCATGAGAAGCTTCTCTGCTTCATCAATGGAAGATTCTTCATGGCATCTCGCGCCACTCTCAATGAGCTCATCGTCTTCTTCCTCGAAGCAGAGGAGCTACTCTGGTTTGTCCACCGAGTACTCTTCTTACTTGCAGCTTCAGAATCAGAACCTTGGTGAATGTACGAACCAGCAAGATCAAGATTACTACATGCTGGGACTGAGGAAATCAGAAGAGCCTCAGAATCAGAAGACCGTTCATCGCTTCTTCGACGAATCGCCCAACAAAAGCAAAAACTCGTGGCTTGATTGTGACGATAAATCGTCCACAACCCAGCTTTCAATATCCATTCCCACCTCCTCTGATGATCACGACCATTTTCCAAGCTTCAATTTCAGAACCCGCCAAGATGTTTGA 1194 0.4539 MSSKKNPHGLCRYYSLKLTLSFTALSILFSSSSLSLWLMMNGGKNRFPFTPSQWQELEHQALIFKYMASGIPIPPDLVFSIKRASLNSPLSSRLLSLPPQHFGWNYLEMGLGRKIDTEPGRCRRTDGKKWRCSKEAYPNSKYCERHMHRGNNRLRKPLQQQQQGFRTTLTSPTNHTNSSTVTKSNIPPPSLSLTTHSSSLTPLSDATHNHSFLYNHQHPSRSSSSSAFGFSLQDDCASHFRNSGYVYDGLKEEVDEHAFFKEPSGTMRSFSASSMEDSSWHLAPLSMSSSSSSSKQRSYSGLSTEYSSYLQLQNQNLGECTNQQDQDYYMLGLRKSEEPQNQKTVHRFFDESPNKSKNSWLDCDDKSSTTQLSISIPTSSDDHDHFPSFNFRTRQDV 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1260 397 MobiDBLite consensus disorder prediction 157 200 - -
Prci4g1260 397 MobiDBLite consensus disorder prediction 347 366 - -
Prci4g1260 397 ProSiteProfiles QLQ domain profile. 48 83 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci4g1260 397 MobiDBLite consensus disorder prediction 371 397 - -
Prci4g1260 397 MobiDBLite consensus disorder prediction 347 362 - -
Prci4g1260 397 Pfam QLQ 48 81 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci4g1260 397 ProSiteProfiles WRC domain profile. 116 160 IPR014977 -
Prci4g1260 397 PANTHER GROWTH-REGULATING FACTOR 5 40 382 IPR031137 GO:0005634|GO:0006351|GO:0032502
Prci4g1260 397 SMART QLQ_2 47 83 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci4g1260 397 Pfam WRC 118 157 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1260 Prci-Chr4 9985986 9987874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1260 46 162 GRF Transcription Factor Family AT3G13960 70.085 7.28e-54 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Prci4g1260 WRC 5.8e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1260 - - gmx:100781613 365.155