Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1242 ATGGAACCCCGTGTTGGCAATAAGTTTCGGCTCGGCCGAAAGATCGGCAGTGGTTCCTTTGGAGAGATCTATTTAGGTACTAATATTCAAACTAACGAAGAGGTCGCAATTAAGCTTGAAAATGTCAAGACAAAGCATCCTCAGTTGTTGTATGAGTCCAAGCTGTACAGAATTCTCCAGGGAGGAACTGGAATTCCAAATGTTAGATGGTTCGGAGTGGAGGGAGATTACAATGTTCTAGTGATAGATCTGCTTGGACCCAGTCTTGAGGATCTATTTAACTTCTGCAGCAGGAAACTATCACTGAAGACAGTTCTCATGCTTGCAGATCAAATGATCAACCGAGTTGAGTTTGTTCATTCTAAATCGTTTCTACATCGGGATATCAAACCAGATAATTTTCTTATGGGCTTAGGAAGGCGTGCAAACCAGGTTTATATTATTGACTTTGGTTTGGCCAAGAAATATAGAGATAGTTCAACTCATCAACACATTCCTTACAGGGAAAATAAGAATTTGACAGGAACTGCAAGATATGCTAGCATGAACACTCACCTTGGCATTGAGCAAAGCCGAAGAGATGATTTAGAGTCTCTTGGTTATGTCCTCATGTACTTTCTGAGAGGAAGTCTTCCTTGGCAGGGACTTAAAGCTGGTACTAAGAAACAGAAATATGAGAAAATTAGTGAAAAGAAGGTTTCTACCTCAATTGAGGCCTTGTGCCGAGGTTATCCAACAGAATTTGCATCTTATTTCCATTACTGCCGGTCATTAAGGTTTGATGATAAGCCAGATTATGCTTACCTGAAAAGGATATTTCGTGACCTCTTTATTCGGGAAGGCTTCCAGTTTGACTATGTCTTTGACTGGACTATCTTGAAGTACCAACAATCACAACTGGCTACTCCTCCTGCACGTGCCCTTGGCCCAAGTGCTGGGACTAGTTCTGGAATGCCGGCTGTTGTGGCTAATGCTGATAGACAGACTGGAGGGGATGAAGGGCGAACTACTGGTCTTGTTTCGATGGATTCTGTGAGGCGAAGAATGTCAGGCCCCATGTTAAATTCTCTTATTTCAACGGCCATTATCTCTCTGTCATGCAGTCTCCAAGCAACAATATTTTGGGTCAGTCAAGTGGGTCATCTCGGCGTGTTGCTGTTCCAAGTAGCCGCGATGCGTTTGTTGGTGGGGAGTTGGATCCACGAACTCGCACTACTGAAGCTAGCCCTGGAGCTGCTCACAGAATTTCAAGCGGGCATAGAAATTCACCACTGGGAGCTTCAGATGCAAAGAGAATATCTTCTGGAAGAAATGCTTCTCATGTCAAGAATTATGAATCAGCAGTCAGGGGCATTGAGAGCTTGCATTTAG 1371 0.4354 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPARALGPSAGTSSGMPAVVANADRQTGGDEGRTTGLVSMDSVRRRMSGPMLNSLISTAIISLSCSLQATIFWVSQVGHLGVLLFQVAAMRLLVGSWIHELALLKLALELLTEFQAGIEIHHWELQMQREYLLEEMLLMSRIMNQQSGALRACI 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1242 456 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Prci4g1242 456 CDD STKc_CK1_delta_epsilon 8 282 - -
Prci4g1242 456 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1242 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Prci4g1242 456 FunFam Putative Casein kinase I 1 85 - -
Prci4g1242 456 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1242 456 FunFam Casein kinase I isoform delta-like 1 308 - -
Prci4g1242 456 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1242 456 Gene3D Transferase(Phosphotransferase) domain 1 1 310 - -
Prci4g1242 456 PANTHER CASEIN KINASE-RELATED 9 326 - -
Prci4g1242 456 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1242 Prci-Chr4 9831951 9838148 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1242 7 214 CBL-interacting serine-threonine protein kinases AT5G58380 27.660 5.26e-12 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Prci4g1242 Pkinase 1.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1242 K02218 - gmx:100811567 693.345