Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1225 ATGGGGACAATTGCCCCATATACAGCAGCTGTACCAAATGGGCCTTTGCTGCACCATTCAGTTACATTATCACCTCCCACAATTCCATCGTCAAAGAAGACAATTGGGGCCGAGCCATCTGCATCACCAAGTGCAAGTGCGACAATATCACCACCTCCATCATTAAAGGTTGTTCCTCCACCCTCAACTGAGCCATCTGCAGCACCAAGTACAAGTCCTACAATATTGCCACCTCCATCATCTAAGGCTGTTCCCCAACCGTCAACTGAGCCTTCTGCATCACCAAGTACAGGTGCTACGATGTCGCTGCCTCCATCATATAAGGTTGTTCCTCCACCCTCATCCCAGTCATCTGCACCACCAAGTGCAGCAGTATTACCACCTCCATCACATAAGATTGCTCCTCCACCCTCAACTTCACAAGTTCAAGTGCCACCATCAGTACAACCAAGTCCGCCTCAAAGAATAGAACCTGCTTTGACACCTCCAGTCTCAACACCCAATGTCCCTGCCCCCATTGCAACACCTTCTGTTGACATGCCTAAACATTCACCAGTTGGCCTGCCGATTGAATCAGATTTACCACCTAAAAGGAATTCAAATCGAAGTCACAACATGGAGCCAATTTCACCATCCCCAGTTACAATGACTCCTGTCAATTGGCCCAAAATCTCACCAGGCAGCTCACCAACTGAAGATGGAAGTTTTCCACCTATTATTCACAAAAGGGATGCGAAGAAAGGTCATGCGCCAGATCCAGCTTTACCAGCCCCTGCAGTACCTTATACCAAATTGCCAAACAGTTCACCAGTCAGCCAACCAACTGGACATGGAAGTTTGCCTCCTAATATCCATAGTAGGAATGCAACCTCTCTTGCACCCCCTGCCAGTTTGCCTCAAATTTCACCAGTCAGCCAACCAACTGGGCATGGAAGTTTGCCACCTAAAGTTCATAAAGGGATTCCAAATGAGGGTCACACCCTGGAGCCAGTTCCACCTGAATCTGTGGCATCCTCCCCAAGAAAAGTTCGACATAACCCACCACTAGTTCACCCTATTTCCCCAAGTTTAACTCCACCCATATTCCCTGCACCAGCTATGTCACCATCAAGGGCATTTCCTGTTAACCCACCGTCTGTCCACCCCATTATACCAGCGTTATCTCCATCAGAATTACCAGCACCCGTTATCTCTCCTTCATCAACTCCTTCCAGAATCTTCAATTGGAAAAATGGTAGAGGACCAGTTGCTGCGCCTTTGTATAAAACACCAAAGCCACTTCCAGCTGTAATACATTCCCCGGCTCTAGCCCCTGTTTCACACGAGCATCACCATGAAAGGAACATAGTCACCAGTCCTGCTCCTGCATCATCAGATCTAATCTCTCCCACTTCAATCAACCAAGGACAAGCAATGCCTCCTTCATTACTCCCAACAAGTGGACAAAGACATTATGCTCCACCGCCAGCAAACCCAGCAACTACATTCTCTTTGCCACCAGCGAGCCAAGTCTCACATGCTCCATCTCCATTGTTCAGATTCGGCCCTCATCCTGCCAAAATACCATTTCTTTCTCCTGAATCATCTCCTGGGTCTTCTTCCAAGAGCCCTAAGACACCGGTCCTGCCTAAAGTTCAAGCTCTTCCACCTCCACCTCCTAATGAAGATTGTTTATCAATTGTCTGCACAGAGCCTTATACAAATTCTCCCCCTGGAGCACCTTGCAGATGTGTCTGGCCGATGCAAGTTGGTCTTCGCCTTGGTGTTTCTCTTTATACCTTCTTCCCTTTGGTTTCAGAACTGGCTTCTGAAATCTCCACTGGGGTTTTCATGAAGCAAAGTCAAGTTCGCATAATGGGAGCTAAATCAGCTGATCAGCAACCAGAGCAAACTGATGTCCTAATAGATTTGGTTCCACTTGGGGAAAAGTTCGATAACACTACAGCTTTTTTGACCTCTCAGAGATTTTGGCATAAACTGGTTGTTATAAAACCTTCCTACTTTGGAGACTATGAAGTGTTATATGTGAACTATCCAGGCTTGCCGCCATCACCTCCTTTACCACCAAGCATGACAATGATAGATGGTGGCCCATATTCTAATGGCAATAATGGAAGGACGATAAAGCCCATTGGGGTGGACATACCAAAAAGGCGGCATAAAAACGGACTTAGCGGCAGCATGATTGCCATTATTTCACTTTCAGCCTTTGTAGCTGTTCTTTTATGCTCTGCTGCTGCATGGGTCTTGCTGTTCAAGCGCAGAGATCATGTATCTCAAGCAGCATCAACTCCACGGACTTTGCCACCTTCTCTTTCCAAGACCCCAGGCACTGCTGGGTCATTGACTGGAGGTGGGACAGTTTCTGCATCGTCATTTCGATCTAGCATTGCAGCTTATAAAGGTTCTGCCAAGACTTTCAGCATGAGTGATATTGAGAGAGCCACTAACAACTTTCACACTTCAAGAATACTTGGAGAAGGTGGTTTTGGGCGTGTTTATAGTGGTACTCTTGATGATGGGACAAAAGTGGCTGTCAAGGTTCTAAAGAGGGAGGATCACCATGGTGATCGTGAATTCCTAGCTGAAGTTGAGATGCTTAGCCGTTTACACCATAGAAATTTGGTCAAGTTGCTAGGCATATGTACAGAGGAAACATTCCGCTGCTTGGTTTATGAACTCATTCCAAATGGCAGTGTGGATTCCCATTTACATGGAGTTGACAGGGAGACCAATCCAATTGATTGGGTTGCCCGCATGAAGATAGCTCTTGGTGCTGCACGTGGTCTGGCTTATCTGCATGAAGATTCCAGTCCCCGTGTAATACATAGGGACTTCAAGTCTTCCAACATCTTGTTGGAAGATGATTTTACACCAAAAGTATCTGATTTTGGACTGGCTCGAATAGCAACAGATGAGGAGAGCAGACACATATCAACACGTGTCATGGGAACTTTTGGCTATGTGGCTCCAGAGTATGCCATGACTGGGCATCTATTGGTAAAGAGTGATGTTTACAGCTATGGTGTTGTTCTCCTTGAGCTTCTGACTGGAAGAAAGCCAGTAGACATGTCACAACCTCCTGGTCAGGAGAACCTTGTCGCATGGGCGCGTCCTCTGCTGACAAGCAAAGAAGGACTCGAAGCAATAATAGATCCATCTCTGGGACCTGATGTGCCTTTTGATAGTGTGGCTAAAGTTGCAGCCATAGCTTCAATGTGTGTGCAGCCAGAGGTATCAAACCGTCCTTTCATGGGAGAGGTTGTTCAAGCTTTAAAACTCGTATGTAATGAATGTGATGAAGCAAAAGAAGCATTTTCAAGAAGTTCTAGCAAGGATGATTTGTCTGTTAATTTGGATATGGGAGTCAGTACTGTTTCTGGACAGCAACCAGGTAACTTCCAAGGACAACACTTTGCTACCAACTTGGACAACGGAGTAGACATTGAAAGAGGGTTATCAGCATCTGAATTGTTCAGTTCATCGGCAAGGTTTGGGGGGCAAGAGTCCGGCTCATTTAGAAGACACTCCTATTCAGGCCCTTTGAGGACTGGAAGAAGCAGACGGTTATGGCATATGTTTAGAAGGCTTGCTGGTGGCAGTGTCAGTGAACATGGAATTATGTACAAGTAA 3633 0.4638 MGTIAPYTAAVPNGPLLHHSVTLSPPTIPSSKKTIGAEPSASPSASATISPPPSLKVVPPPSTEPSAAPSTSPTILPPPSSKAVPQPSTEPSASPSTGATMSLPPSYKVVPPPSSQSSAPPSAAVLPPPSHKIAPPPSTSQVQVPPSVQPSPPQRIEPALTPPVSTPNVPAPIATPSVDMPKHSPVGLPIESDLPPKRNSNRSHNMEPISPSPVTMTPVNWPKISPGSSPTEDGSFPPIIHKRDAKKGHAPDPALPAPAVPYTKLPNSSPVSQPTGHGSLPPNIHSRNATSLAPPASLPQISPVSQPTGHGSLPPKVHKGIPNEGHTLEPVPPESVASSPRKVRHNPPLVHPISPSLTPPIFPAPAMSPSRAFPVNPPSVHPIIPALSPSELPAPVISPSSTPSRIFNWKNGRGPVAAPLYKTPKPLPAVIHSPALAPVSHEHHHERNIVTSPAPASSDLISPTSINQGQAMPPSLLPTSGQRHYAPPPANPATTFSLPPASQVSHAPSPLFRFGPHPAKIPFLSPESSPGSSSKSPKTPVLPKVQALPPPPPNEDCLSIVCTEPYTNSPPGAPCRCVWPMQVGLRLGVSLYTFFPLVSELASEISTGVFMKQSQVRIMGAKSADQQPEQTDVLIDLVPLGEKFDNTTAFLTSQRFWHKLVVIKPSYFGDYEVLYVNYPGLPPSPPLPPSMTMIDGGPYSNGNNGRTIKPIGVDIPKRRHKNGLSGSMIAIISLSAFVAVLLCSAAAWVLLFKRRDHVSQAASTPRTLPPSLSKTPGTAGSLTGGGTVSASXSFRSSIAAYKGSAKTFSMSDIERATNNFHTSRILGEGGFGRVYSGTLDDGTKVAVKVLKREDHHGDREFLAEVEMLSRLHHRNLVKLLGICTEETFRCLVYELIPNGSVDSHLHGVDRETNPIDWVARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEDDFTPKVSDFGLARIATDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVAWARPLLTSKEGLEAIIDPSLGPDVPFDSVAKVAAIASMCVQPEVSNRPFMGEVVQALKLVCNECDEAKEAFSRSSSKDDLSVNLDMGVSTVSGQQPGNFQGQHFATNLDNGVDIERGLSASELFSSSARFGGQESGSFRRHSYSGPLRTGRSRRLWHMFRRLAGGSVSEHGIMYK 1211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1225 1211 Gene3D Transferase(Phosphotransferase) domain 1 896 1118 - -
Prci4g1225 1211 MobiDBLite consensus disorder prediction 526 540 - -
Prci4g1225 1211 MobiDBLite consensus disorder prediction 452 549 - -
Prci4g1225 1211 CDD STKc_IRAK 826 1094 - -
Prci4g1225 1211 FunFam Receptor-like serine/threonine-protein kinase ALE2 896 1114 - -
Prci4g1225 1211 Pfam Protein tyrosine and serine/threonine kinase 821 1093 IPR001245 GO:0004672|GO:0006468
Prci4g1225 1211 MobiDBLite consensus disorder prediction 199 232 - -
Prci4g1225 1211 MobiDBLite consensus disorder prediction 53 85 - -
Prci4g1225 1211 MobiDBLite consensus disorder prediction 265 309 - -
Prci4g1225 1211 SUPERFAMILY Protein kinase-like (PK-like) 801 1093 IPR011009 -
Prci4g1225 1211 ProSiteProfiles Protein kinase domain profile. 820 1096 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1225 1211 MobiDBLite consensus disorder prediction 452 477 - -
Prci4g1225 1211 ProSitePatterns Serine/Threonine protein kinases active-site signature. 942 954 IPR008271 GO:0004672|GO:0006468
Prci4g1225 1211 MobiDBLite consensus disorder prediction 23 51 - -
Prci4g1225 1211 FunFam receptor-like serine/threonine-protein kinase ALE2 793 895 - -
Prci4g1225 1211 Gene3D Phosphorylase Kinase; domain 1 792 895 - -
Prci4g1225 1211 MobiDBLite consensus disorder prediction 106 170 - -
Prci4g1225 1211 PANTHER OS01G0750732 PROTEIN 549 1119 - -
Prci4g1225 1211 MobiDBLite consensus disorder prediction 86 103 - -
Prci4g1225 1211 MobiDBLite consensus disorder prediction 1 396 - -
Prci4g1225 1211 ProSitePatterns Protein kinases ATP-binding region signature. 826 848 IPR017441 GO:0005524
Prci4g1225 1211 MobiDBLite consensus disorder prediction 763 786 - -
Prci4g1225 1211 MobiDBLite consensus disorder prediction 352 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1225 Prci-Chr4 9622782 9632407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1225 348 1207 Receptor kinase-like Gene Family AT5G56890 57.393 0.0 898
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Prci4g1225 PK_Tyr_Ser-Thr 2.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1225 - - gmx:100816296 1388.24