Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1223 ATGGGAAAGACCAGGAAATGGCTAAGAAACTTGTTGATGTCCCAGAAGAAACACGAGGAAAAAGAGATGAGACAATGTGGAGAGAATGATCAGATTTCTTCAACTGCCTCTGAAACGCCAACCCCAAAAGAGAAACGTAGATGGAGTTTCCGTAGGCCTTCAAATTCCAAGCAACTCAATTCCGCAGAAACCAACGTGACGGTCTCACCGACATTACCAGTACCACCAGGTGCCACAGATGCTGATCAAAATTTGCAGAACAGCCACTTGGCTATTATCATCACTTCCAGCATCACAGCTGTGAGTACTGAAGATGCTGCTGCCATTAAAATTCAATCTGCTTTTCGGTCTTACTTGGCAAGAAAAGCATTGGGTGCTCTGAGAGGAATAGTGAAGTTGCAGGCATTAGTAAGGGGAGAGTTGGTGAGAAAATGGGCTTCGGCTACTCTTAGACGCATGGAAGCTTTATTGACAGCACAAGCCAAAGCTTGTGCTCTGAGGATCCGAATGGCATCAGAAGCGAAGTCTAATCAGAGACATTCCACTTACCACAGAAAAGCACCAGGCAACTTGATAAGGCATGTGTATGACTTTGATGAAATTGACATGGAATTGGAAGAGAACATCAAAATTGTGAAGGTGGATGCTTATGGATCAAAAGACAGCGGCAGAAGCAGAAATAACACCATAAATTACACTCAGCACAATGGTTCTGAGCAGAGTTTCTCAGCACATTATCCCACATATGGTTCATACTCAAAAGAAGAAGACCACAAGGCATCTCCAGCCCCATCAGCACAGAGCAGCCGTGCATCAAAACCTGATGATAAAAAGCTTCTTTTTACTTCCCCAGTGACCTCCTCTCACAACTCATCAGTCCCAAATTATATGGCCAACACAGAATCATCAAGGGCCAAATTCAGATCAAATAGTGCGCCCAGGCAAAGACCAGACTCCTTTGAGAGGCAATTAAGCAGGCCCAGAGCTTCAATGGAAACAAGAAATACTGGTCACAGACCAGTCATGCAGATGAGAAGGTCGTCTTCACATGTAGGTGCTGTTGCTCAAAACTACCAATACCTAAGCTCAATCAAACTTGACAGATCCGCTGCTTCACTGATAGAAAGTGTGTGTGGTTCTACCAGCACGGTTCTCACAAATATTCAGTACTGCAAATCTCTTGTTTCATATAATCCTCATGAAGATAGGTACTACTGA 1218 0.4401 MGKTRKWLRNLLMSQKKHEEKEMRQCGENDQISSTASETPTPKEKRRWSFRRPSNSKQLNSAETNVTVSPTLPVPPGATDADQNLQNSHLAIIITSSITAVSTEDAAAIKIQSAFRSYLARKALGALRGIVKLQALVRGELVRKWASATLRRMEALLTAQAKACALRIRMASEAKSNQRHSTYHRKAPGNLIRHVYDFDEIDMELEENIKIVKVDAYGSKDSGRSRNNTINYTQHNGSEQSFSAHYPTYGSYSKEEDHKASPAPSAQSSRASKPDDKKLLFTSPVTSSHNSSVPNYMANTESSRAKFRSNSAPRQRPDSFERQLSRPRASMETRNTGHRPVMQMRRSSSHVGAVAQNYQYLSSIKLDRSAASLIESVCGSTSTVLTNIQYCKSLVSYNPHEDRYY 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1223 405 Pfam Protein of unknown function (DUF4005) 264 339 IPR025064 -
Prci4g1223 405 ProSiteProfiles IQ motif profile. 128 155 IPR000048 GO:0005515
Prci4g1223 405 MobiDBLite consensus disorder prediction 220 336 - -
Prci4g1223 405 Gene3D - 103 156 - -
Prci4g1223 405 MobiDBLite consensus disorder prediction 12 27 - -
Prci4g1223 405 MobiDBLite consensus disorder prediction 53 68 - -
Prci4g1223 405 ProSiteProfiles IQ motif profile. 104 132 IPR000048 GO:0005515
Prci4g1223 405 MobiDBLite consensus disorder prediction 1 68 - -
Prci4g1223 405 Pfam IQ calmodulin-binding motif 128 145 IPR000048 GO:0005515
Prci4g1223 405 Pfam IQ calmodulin-binding motif 106 123 IPR000048 GO:0005515
Prci4g1223 405 MobiDBLite consensus disorder prediction 221 248 - -
Prci4g1223 405 SMART iq_5 103 125 IPR000048 GO:0005515
Prci4g1223 405 SMART iq_5 126 147 IPR000048 GO:0005515
Prci4g1223 405 PANTHER IQ-DOMAIN 5-RELATED 1 332 - -
Prci4g1223 405 MobiDBLite consensus disorder prediction 281 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1223 Prci-Chr4 9597610 9599435 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1223 1 390 IQD Protein Family AT4G14750 39.430 4.52e-64 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1223 - - pcin:129307883 788.104