Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1202 ATGCTGATACGGAGAAACTGTAGTTTCATTGTGACGATTGTGGAATCTGCAGAATTGGTGGTCGTGATAATTTTTTCCACTGCAATAGAGTTTGGTACTATCATATCTTATATAAAGTGCTTGAGTGATGGGTCTTGCTATTCACTTGGTCTACTTGATAATCATATATGTGTGGAGGACTCCATGAGGCATCACTGTCCCATATGTTATGAGTACCTTTTTGATTCAGTGAAGGACACTGGCGTTGTGAAATGTGGTCACACAATGCACTGTGAATGTTTCAAAGAGATGATAAAACGTGAAAAGTATTGCTGCCCCATATGCTCCAAGTCAGCGATTGACATGTCCATGATCTGGAAGATGATTGATGAAGAGATTGAAGAAACTCCCATGCCTGAAGGTTATCGACACAGGAAGGTCTGGATACTGTGTAATGACTGTAATGATACAACCGAAGTGAACTTCCACATAGTTGGGCAAAAATGTGGGCACTGCAGCTCATACAATACTCGTGAAATTGCTCCAACTGTTCTTCCTCAATGA 543 0.4088 MLIRRNCSFIVTIVESAELVVVIIFSTAIEFGTIISYIKCLSDGSCYSLGLLDNHICVEDSMRHHCPICYEYLFDSVKDTGVVKCGHTMHCECFKEMIKREKYCCPICSKSAIDMSMIWKMIDEEIEETPMPEGYRHRKVWILCNDCNDTTEVNFHIVGQKCGHCSSYNTREIAPTVLPQ 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1202 180 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 35 176 - -
Prci4g1202 180 Gene3D - 140 178 - -
Prci4g1202 180 SMART ring_2 66 108 IPR001841 -
Prci4g1202 180 Pfam Zinc-ribbon 113 171 IPR039512 -
Prci4g1202 180 SUPERFAMILY RING/U-box 65 112 - -
Prci4g1202 180 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 55 139 IPR013083 -
Prci4g1202 180 Pfam Zinc finger, C3HC4 type (RING finger) 66 108 IPR018957 GO:0046872
Prci4g1202 180 ProSiteProfiles Zinc finger RING-type profile. 66 109 IPR001841 -
Prci4g1202 180 FunFam RING finger and CHY zinc finger domain-containing protein 1 137 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1202 Prci-Chr4 9385299 9389191 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1202 32 179 C2H2 Transcription Factor Family AT3G18290 39.865 4.62e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1202 K10144 - tcc:18603446 261.151