Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1201 ATGACAATGAACGTCTTGGTTTTGGGAAGATGGGATACGGGAGAAGATGCAAGATTCGGGCTCCCTGCTGCAACGAACTGTACTCCTGCCGTCATTGTCATAACGAGGCTACGGTTGCTCAAGTTTGCACGAACTGTGGCGTCAAAATGGGAGAATATTTCTGCAACACATGCAAATTCTTTGATGCTGATACGGAGAAACTGTAGTTTCATTGTGACGATTGTGGAATCTGCAGGGTCTTGCTATTCACTTGGTCTACTTGATAATCATATATGTGTGGAGGACTCCATGAGGCATCACTGTCCCATATGTTATGAGTACCTTTTTGATTCAGTGAAGGACACTGGCGTTGTGAAATGTGGTCACACAATGCACTGTGAATGTTTCAAAGAGATGATAAAACGTGAAAAGTATTGCTGCCCCATATGCTCCAAGTCAGCGATTGACATGTCCATGATCTGGAAGATGATTGATGAAGAGATTGAAGAAACTCCCATGCCTGAAGGTTATCGACACAGGAAGGTCTGGATACTGTGTAATGACTGTAATGATACAACCGAAGTGAACTTCCACATAGTTGGGCAAAAATGTGGGCACTGCAGCTCATACAATACTCGTGAAATTGCTCCAACTGTTCTTCCTCAATGA 648 0.4352 MTMNVLVLGRWDTGEDARFGLPAATNCTPAVIVITRLRLLKFARTVASKWENISATHANSLMLIRRNCSFIVTIVESAGSCYSLGLLDNHICVEDSMRHHCPICYEYLFDSVKDTGVVKCGHTMHCECFKEMIKREKYCCPICSKSAIDMSMIWKMIDEEIEETPMPEGYRHRKVWILCNDCNDTTEVNFHIVGQKCGHCSSYNTREIAPTVLPQ 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1201 215 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 77 211 - -
Prci4g1201 215 Pfam Zinc finger, C3HC4 type (RING finger) 101 143 IPR018957 GO:0046872
Prci4g1201 215 FunFam RING finger and CHY zinc finger domain-containing protein 1 172 214 - -
Prci4g1201 215 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 173 IPR013083 -
Prci4g1201 215 Pfam Zinc-ribbon 148 206 IPR039512 -
Prci4g1201 215 SUPERFAMILY RING/U-box 100 147 - -
Prci4g1201 215 SMART ring_2 101 143 IPR001841 -
Prci4g1201 215 ProSiteProfiles Zinc finger RING-type profile. 101 144 IPR001841 -
Prci4g1201 215 Gene3D - 174 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1201 Prci-Chr4 9385291 9389191 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1201 84 214 C2H2 Transcription Factor Family AT3G18290 43.182 7.28e-28 108