Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1199 ATGACAATGAACGTCTTGGTTTTGGGAAGATGGGATACGGGAGAAGATGCAAGATTCGGGCTCCCTGCTGCAACGAACTGTACTCCTGCCGTCATTGTCATAACGAGGCTACGGTTGCTCAAGTTTGCACGAACTGTGGCGTCAAAATGGGAGAATATTTCTGCAACACATGCAAATTCTTTGATGCTGATACGGAGAAACTGTAGTTTCATTGTGACGATTGTGGAATCTGCAGAATTGGTGGTCGTGATAATTTTTTCCACTGCAATAGAGTTTGGTACTATCATATCTTATATAAAGTGCTTGAGTGATGGGTCTTGCTATTCACTTGGTCTACTTGATAATCATATATGTGTGGAGGACTCCATGAGGCATCACTGTCCCATATGTTATGAGTACCTTTTTGATTCAGTGAAGGACACTGGCGTTGTGAAATGTGGTCACACAATGCACTGTGAATGTTTCAAAGAGATGATAAAACGTGAAAAGTATTGCTGCCCCATATGCTCCAAGTCAGCGATTGACATGTCCATGATCTGGAAGATGATTGATGAAGAGATTGAAGAAACTCCCATGCCTGAAGGTTATCGACACAGGAAGGTCTGGATACTGTGTAATGACTGTAATGATACAACCGAAGTGAACTTCCACATAGTTGGGCAAAAATGTGGGCACTGCAGCTCATACAATACTCGTGAAATTGCTCCAACTGTTCTTCCTCAATGA 726 0.4242 MTMNVLVLGRWDTGEDARFGLPAATNCTPAVIVITRLRLLKFARTVASKWENISATHANSLMLIRRNCSFIVTIVESAELVVVIIFSTAIEFGTIISYIKCLSDGSCYSLGLLDNHICVEDSMRHHCPICYEYLFDSVKDTGVVKCGHTMHCECFKEMIKREKYCCPICSKSAIDMSMIWKMIDEEIEETPMPEGYRHRKVWILCNDCNDTTEVNFHIVGQKCGHCSSYNTREIAPTVLPQ 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1199 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 116 199 IPR013083 -
Prci4g1199 241 FunFam RING finger and CHY zinc finger domain-containing protein 1 198 240 - -
Prci4g1199 241 SMART ring_2 127 169 IPR001841 -
Prci4g1199 241 Pfam Zinc finger, C3HC4 type (RING finger) 127 169 IPR018957 GO:0046872
Prci4g1199 241 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 96 237 - -
Prci4g1199 241 Gene3D - 200 239 - -
Prci4g1199 241 Pfam Zinc-ribbon 174 232 IPR039512 -
Prci4g1199 241 SUPERFAMILY RING/U-box 126 173 - -
Prci4g1199 241 CDD RING-H2_Pirh2-like 126 170 - -
Prci4g1199 241 ProSiteProfiles Zinc finger RING-type profile. 127 170 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1199 Prci-Chr4 9385283 9389191 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1199 93 240 C2H2 Transcription Factor Family AT3G18290 39.865 4.89e-29 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1199 K10144 - qsu:112031935 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g1199 4 9385283 9389191 Prci4g1199 4 9385283 9389191 ECH