Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1189 ATGGGTGGGTGTTTTCCTTGTTTTGACAAGGAGGACAGCGGGGTCAAGGAAGTGGTCAAGAAAGATTCTCTTAAAGAAGGTTCAGCTGCTCAGTCTCATCACGTCAATAGGGTTAGCTCAGTTCAAAAGGATGGGCCAACTGCCCACATTGCTGCACAAACTTTTACATTTCGAGAGCTTGCAGCTGCCACAAGAAATTTCAGGCCTGAATGTTTATTAGGTGAAGGTGGTTTTGGACGGGTTTATAAAGGCCACCTTGAAAGCACAGGGCAAGTTGTTGCTGTAAAACAGCTTGACCGCAATGGCCTTCAAGGAAATCGAGAGTTTTTGGTGGAGGTGCTCATGCTTAGCCTCTTACATCACCCAAATCTTGTGAGCTTAATTGGTTATTGTGCTGATGGGGATCAGCGGCTGCTTGTCTATGAACTTATGCCTTTGGGGTCTTTGGAGGATCACCTACATGATCTTCCTCCTGACAAGGAGCCTCTGGACTGGAATACAAGGATGAAAATAGCAGCTGGAGCAGCAAAGGGGTTGGAATATTTGCATGACAAAGCAAACCCACCTGTAATATATAGAGACCTAAAATCATCCAATATCCTGCTAGATGAGGGTTTTCATCCCAAGTTATCGGATTTTGGGCTGGCAAAACTTGGTCCAGTTGGTGATAAGACTCATGTATCAACACGAGTAATGGGAACATATGGTTATTGTGCCCCTGAATATGCTATGACTGGACAGCTAACTCTGAAGTCTGATGTGTACAGTTTTGGAGTTGTTTTCCTGGAACTTATTACTGGGCGCAAGGCTATTGATAATACACGTGCACATGGCGAGCATAATCTTGTGGCATGGGCACGACCTCTATTTAAAGACCGTAGGAAGTTCCCTGCAATGGCTGATCCTCTGCTTCAAGGCCGTTATCCAATGCGAGGACTCTATCAAGCACTGGCAGTTGCAGCTATGTGCTTGCAAGAACAAGCTGCTACAAGGCCTCTTATTGGAGACGTTGTGACCGCTCTTACATACTTGGCCTCGCAGACATATGATCCAAATGGAGCTAGCCACACTTGCCGAGTTGGTCCATCAACCCCAAGGAACAAGGAGGATCTAAAGAACACAGCAGATAGCTCGGGCAGCCCTGATCATGGACGATATTATGAATCACCTTCAACCCATAAAAACTCGCCTGATTACAGGAAGAGAGATGGTAGGGATACAAGTGCTGGGACAGGCTTGGGAAGGATTGAAACTGGTGGGGGCTCAGGAAGAAGATGGGGATTGGATGATGGAGAAAGGCAGGACTCTCAGAGAGACAGCCCTGTAAATGCTGGAAGAGGTAGGGAAACTCCAAGGAACCGTGACCTAGACCGAGAACGCGCAGTTGCAGAAGCAAAAGTATGGGGTGAAAACTGGAGAGATAAAAAGCGGGCAAATGCGAAGGGAAGCTTTGATGCTACAAATGAGTGA 1470 0.468 MGGCFPCFDKEDSGVKEVVKKDSLKEGSAAQSHHVNRVSSVQKDGPTAHIAAQTFTFRELAAATRNFRPECLLGEGGFGRVYKGHLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVSLIGYCADGDQRLLVYELMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGFHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRAHGEHNLVAWARPLFKDRRKFPAMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNGASHTCRVGPSTPRNKEDLKNTADSSGSPDHGRYYESPSTHKNSPDYRKRDGRDTSAGTGLGRIETGGGSGRRWGLDDGERQDSQRDSPVNAGRGRETPRNRDLDRERAVAEAKVWGENWRDKKRANAKGSFDATNE 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1189 489 ProSiteProfiles Protein kinase domain profile. 67 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1189 489 SUPERFAMILY Protein kinase-like (PK-like) 50 341 IPR011009 -
Prci4g1189 489 FunFam Serine/threonine-protein kinase PBS1 40 143 - -
Prci4g1189 489 PANTHER OS07G0668900 PROTEIN 4 352 - -
Prci4g1189 489 SMART serkin_6 67 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1189 489 Pfam Protein kinase domain 72 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1189 489 MobiDBLite consensus disorder prediction 351 461 - -
Prci4g1189 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Prci4g1189 489 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Prci4g1189 489 Gene3D Transferase(Phosphotransferase) domain 1 144 357 - -
Prci4g1189 489 MobiDBLite consensus disorder prediction 470 489 - -
Prci4g1189 489 FunFam Serine/threonine-protein kinase PBS1 144 359 - -
Prci4g1189 489 Gene3D Phosphorylase Kinase; domain 1 38 143 - -
Prci4g1189 489 MobiDBLite consensus disorder prediction 394 408 - -
Prci4g1189 489 CDD STKc_IRAK 73 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1189 Prci-Chr4 9324755 9333037 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1189 47 346 Glycoside Hydrolase AT3G07070 75.333 1.34e-167 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Prci4g1189 Pkinase 3.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1189 - - qsa:O6P43_021706 857.055