Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1188 ATGGGTGGGTGTTTTCCTTGTTTTGACAAGGAGGACAGCGGGGTCAAGGAAGTGGTCAAGAAAGATTCTCTTAAAGAAGGTTCAGCTGCTCAGTCTCATCACGTCAATAGGGTTAGCTCAGATAAAACAAAATCAAGAAGTGGCTCTGATTCTAAGAAGGAATTGCCAGTTCAAAAGGATGGGCCAACTGCCCACATTGCTGCACAAACTTTTACATTTCGAGAGCTTGCAGCTGCCACAAGAAATTTCAGGCCTGAATGTTTATTAGGTGAAGGTGGTTTTGGACGGGTTTATAAAGGCCACCTTGAAAGCACAGGGCAAGTTGTTGCTGTAAAACAGCTTGACCGCAATGGCCTTCAAGGAAATCGAGAGTTTTTGGTGGAGGTGCTCATGCTTAGCCTCTTACATCACCCAAATCTTGTGAGCTTAATTGGTTATTGTGCTGATGGGGATCAGCGGCTGCTTGTCTATGAACTTATGCCTTTGGGGTCTTTGGAGGATCACCTACATGATCTTCCTCCTGACAAGGAGCCTCTGGACTGGAATACAAGGATGAAAATAGCAGCTGGAGCAGCAAAGGGGTTGGAATATTTGCATGACAAAGCAAACCCACCTGTAATATATAGAGACCTAAAATCATCCAATATCCTGCTAGATGAGGGTTTTCATCCCAAGTTATCGGATTTTGGGCTGGCAAAACTTGGTCCAGTTGGTGATAAGACTCATGTATCAACACGAGTAATGGGAACATATGGTTATTGTGCCCCTGAATATGCTATGACTGGACAGCTAACTCTGAAGTCTGATGTGTACAGTTTTGGAGTTGTTTTCCTGGAACTTATTACTGGGCGCAAGGCTATTGATAATACACGTGCACATGGCGAGCATAATCTTGTGGCATGGGCACGACCTCTATTTAAAGACCGTAGGAAGTTCCCTGCAATGGCTGATCCTCTGCTTCAAGGCCGTTATCCAATGCGAGGACTCTATCAAGCACTGGCAGTTGCAGCTATGTGCTTGCAAGAACAAGCTGCTACAAGGCCTCTTATTGGAGACGTTGTGACCGCTCTTACATACTTGGCCTCGCAGACATATGATCCAAATGGAGCTAGCCACACTTGCCGAGTTGGTCCATCAACCCCAAGGAACAAGGAGGATCTAAAGAACACAGCAGATAGCTCGGGCAGCCCTGATCATGGACGATATTATGAATCACCTTCAACCCATAAAAACTCGCCTGATTACAGGAAGAGAGATGGTAGGGATACAAGTGCTGGGACAGGCTTGGGAAGGATTGAAACTGGTGGGGGCTCAGGAAGAAGATGGGGATTGGATGATGGAGAAAGGCAGGACTCTCAGAGAGACAGCCCTGTAAATGCTGGAAGAGGTAGGGAAACTCCAAGGAACCGTGACCTAGACCGAGAACGCGCAGTTGCAGAAGCAAAAGTATGGGGTGAAAACTGGAGAGATAAAAAGCGGGCAAATGCGAAGGGAAGCTTTGATGCTACAAATGAGTGA 1518 0.4644 MGGCFPCFDKEDSGVKEVVKKDSLKEGSAAQSHHVNRVSSDKTKSRSGSDSKKELPVQKDGPTAHIAAQTFTFRELAAATRNFRPECLLGEGGFGRVYKGHLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVSLIGYCADGDQRLLVYELMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGFHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRAHGEHNLVAWARPLFKDRRKFPAMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNGASHTCRVGPSTPRNKEDLKNTADSSGSPDHGRYYESPSTHKNSPDYRKRDGRDTSAGTGLGRIETGGGSGRRWGLDDGERQDSQRDSPVNAGRGRETPRNRDLDRERAVAEAKVWGENWRDKKRANAKGSFDATNE 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1188 505 FunFam Serine/threonine-protein kinase PBS1 160 375 - -
Prci4g1188 505 Gene3D Phosphorylase Kinase; domain 1 54 159 - -
Prci4g1188 505 SMART serkin_6 83 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1188 505 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Prci4g1188 505 Pfam Protein kinase domain 88 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1188 505 Gene3D Transferase(Phosphotransferase) domain 1 160 373 - -
Prci4g1188 505 MobiDBLite consensus disorder prediction 23 61 - -
Prci4g1188 505 MobiDBLite consensus disorder prediction 37 59 - -
Prci4g1188 505 MobiDBLite consensus disorder prediction 367 477 - -
Prci4g1188 505 FunFam Serine/threonine-protein kinase PBS1 56 159 - -
Prci4g1188 505 MobiDBLite consensus disorder prediction 486 505 - -
Prci4g1188 505 ProSiteProfiles Protein kinase domain profile. 83 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1188 505 SUPERFAMILY Protein kinase-like (PK-like) 65 357 IPR011009 -
Prci4g1188 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Prci4g1188 505 PANTHER OS07G0668900 PROTEIN 4 368 - -
Prci4g1188 505 CDD STKc_IRAK 89 358 - -
Prci4g1188 505 MobiDBLite consensus disorder prediction 410 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1188 Prci-Chr4 9324755 9333037 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1188 4 362 Glycoside Hydrolase AT3G07070 65.489 3.60e-168 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Prci4g1188 Pkinase 3.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1188 - - qsa:O6P43_021706 892.108