Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1187 ATGCTTAGCCTCTTACATCACCCAAATCTTGTGAGCTTAATTGGTTATTGTGCTGATGGGGATCAGCGGCTGCTTGTCTATGAACTTATGCCTTTGGGGTCTTTGGAGGATCACCTACATGATCTTCCTCCTGACAAGGAGCCTCTGGACTGGAATACAAGGATGAAAATAGCAGCTGGAGCAGCAAAGGGGTTGGAATATTTGCATGACAAAGCAAACCCACCTGTAATATATAGAGACCTAAAATCATCCAATATCCTGCTAGATGAGGGTTTTCATCCCAAGTTATCGGATTTTGGGCTGGCAAAACTTGGTCCAGTTGGTGATAAGACTCATGTATCAACACGAGTAATGGGAACATATGGTTATTGTGCCCCTGAATATGCTATGACTGGACAGCTAACTCTGAAGTCTGATGTGTACAGTTTTGGAGTTGTTTTCCTGGAACTTATTACTGGGCGCAAGGCTATTGATAATACACGTGCACATGGCGAGCATAATCTTGTGGCATGGGCACGACCTCTATTTAAAGACCGTAGGAAGTTCCCTGCAATGGCTGATCCTCTGCTTCAAGGCCGTTATCCAATGCGAGGACTCTATCAAGCACTGGCAGTTGCAGCTATGTGCTTGCAAGAACAAGCTGCTACAAGGCCTCTTATTGGAGACGTTGTGACCGCTCTTACATACTTGGCCTCGCAGACATATGATCCAAATGGAGCTAGCCACACTTGCCGAGTTGGTCCATCAACCCCAAGGAACAAGGAGGATCTAAAGAACACAGCAGATAGCTCGGGCAGCCCTGATCATGGACGATATTATGAATCACCTTCAACCCATAAAAACTCGCCTGATTACAGGAAGAGAGATGGTAGGGATACAAGTGCTGGGACAGGCTTGGGAAGGATTGAAACTGGTGGGGGCTCAGGAAGAAGATGGGGATTGGATGATGGAGAAAGGCAGGACTCTCAGAGAGACAGCCCTGTAAATGCTGGAAGAGGTAGGGAAACTCCAAGGAACCGTGACCTAGACCGAGAACGCGCAGTTGCAGAAGCAAAAGTATGGGGTGAAAACTGGAGAGATAAAAAGCGGGCAAATGCGAAGGGAAGCTTTGATGCTACAAATGAGTGA 1128 0.469 MLSLLHHPNLVSLIGYCADGDQRLLVYELMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGFHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRAHGEHNLVAWARPLFKDRRKFPAMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNGASHTCRVGPSTPRNKEDLKNTADSSGSPDHGRYYESPSTHKNSPDYRKRDGRDTSAGTGLGRIETGGGSGRRWGLDDGERQDSQRDSPVNAGRGRETPRNRDLDRERAVAEAKVWGENWRDKKRANAKGSFDATNE 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1187 375 MobiDBLite consensus disorder prediction 237 347 - -
Prci4g1187 375 PANTHER OS07G0668900 PROTEIN 1 238 - -
Prci4g1187 375 MobiDBLite consensus disorder prediction 280 294 - -
Prci4g1187 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 76 88 IPR008271 GO:0004672|GO:0006468
Prci4g1187 375 FunFam Serine/threonine-protein kinase PBS1 30 245 - -
Prci4g1187 375 SUPERFAMILY Protein kinase-like (PK-like) 2 227 IPR011009 -
Prci4g1187 375 SMART serkin_6 1 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1187 375 Gene3D Transferase(Phosphotransferase) domain 1 31 243 - -
Prci4g1187 375 Gene3D Phosphorylase Kinase; domain 1 1 30 - -
Prci4g1187 375 ProSiteProfiles Protein kinase domain profile. 1 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1187 375 MobiDBLite consensus disorder prediction 356 375 - -
Prci4g1187 375 Pfam Protein kinase domain 2 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1187 Prci-Chr4 9324755 9333037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1187 1 232 Glycoside Hydrolase AT3G07070 73.707 1.43e-123 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Prci4g1187 Pkinase 5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1187 - - gmx:100814575 685.256