Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1181 ATGGAATTGAATCGCCAGCGAATGACGCGGCGGAGGTGGGAGCAGGAGAAGCTAGTGAGGAAAGTAATTTGGCCTTCAATTCAGGGACATGCTTGTCCGATATGTTTCAAAAACCTTGAAGATCATTACAAGGAAGCTGCAATCCTCTCCGTGTGTATGCACGCCTACTGCATCGATTGCATTCGGAAATGGAGTGGCTTGAAAAGAAGGTGTCCCCTCTGTAATGCAAACTTCAAGTCTTGGTTCTGTAAGCTCAGTCTTTCCTCCAGAGAGTTCTAGAAGGAGGTGTTACCCTTTGATGATTTAACCCAAAATTCTCATCAAGAAATTAGTGCAAGCCGTGTAAATGCCTCTAGAACAAGAGCTGCTTTAGATGAAAGGCGAACTAAGGCACTGCTATGGCGGCGGTCATTTGGACGTCCTGGACATGCGAGTACCGAAGCTATTTCTCAAAGGAAACTTGATTGGCGTGCAAGCATATATAAGAAGCAGTTGAAGGCAGTTCCTTTAACCTCTAGCCATCTTGATCAGATTAAATCAAGAAATAGTTTGTTAAGAGAGAAAACACTGCAAAAGATTGAGCCATGGATACGGAGGGAACTACAAGCTGTTCTTGGTGACCCAGATCCAGCTGTCATTGTTCATGTGGCAGCCTTACAGTATCTTGCATGGCTGGAGGAAAAAGTTGCTTCTGGACAGTTTGTTGTTGAAGAGAGGTTTATATCACCTCTCCGTCCTTTCTTGCAAGATAAAGCTGGCATCTTTTGGCATGAACTAAGATTGTATGGAATAAATATGAACTATAAGCAAGTGCAAGATCACTCTTCAAGAAGCAATAAGAAGATGGCACATTCCACCTAA 861 0.4344 MELNRQRMTRRRWEQEKLVRKVIWPSIQGHACPICFKNLEDHYKEAAILSVCMHAYCIDCIRKWSGLKRRCPLCNANFKSWFCKLSLSSREFXKEVLPFDDLTQNSHQEISASRVNASRTRAALDERRTKALLWRRSFGRPGHASTEAISQRKLDWRASIYKKQLKAVPLTSSHLDQIKSRNSLLREKTLQKIEPWIRRELQAVLGDPDPAVIVHVAALQYLAWLEEKVASGQFVVEERFISPLRPFLQDKAGIFWHELRLYGINMNYKQVQDHSSRSNKKMAHST 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1181 286 ProSiteProfiles Zinc finger RING-type profile. 32 75 IPR001841 -
Prci4g1181 286 SMART ring_2 32 74 IPR001841 -
Prci4g1181 286 ProSitePatterns Zinc finger RING-type signature. 52 61 IPR017907 -
Prci4g1181 286 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 27 92 IPR013083 -
Prci4g1181 286 SUPERFAMILY RING/U-box 25 81 - -
Prci4g1181 286 Pfam Ring finger domain 31 75 IPR001841 -
Prci4g1181 286 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TOPORS 17 260 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1181 17 259 C3H Transcription Factor Family AT2G39100 47.431 5.19e-74 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1181 - - pcin:129308821 585.104