Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1174 ATGGGTTCGTCTCTTCTTCAAAGCAACCCATCTTCTTTGGGTGAGAGAAGAGGAAGAAGAAAGCAAGGAGAAGCAGGAAGGTTTCTGGGGGTGAGAAGAAGACCATGGGGAAGATATGCTGCAGAAATTAGGGACCCCACAACTAAAGAAAGACACTGGCTTGGCACTTTTGATACTGCCCAAGAAGCTGCTTTGGCTTATGACAGAGCTGCTTTGTCCATGAAAGGAAGCCAAGCAAGAACCAACTTCGTATACACTGACAATACAACCTTTGACACGACTCTTCTTTGTCCCTTTGATGTTCAGCTTCAGTCACTCTTTAACACTACCCAGATGAAACCCTCAACCAATCAGAACAGTCCACCTCAGCTTTCTGAAACTTATTCCCAGGCTGGGACTAATGCTGCAAGTGATTCTTCTTCAGCTCAGGTGGGTGATAACTTATTCTTCTTCTCCAATGGTGATTCTAAATCAGGTTACCTGGAATGCATAGTTCCTGATGTCTGTTTCAGACCTTCATCTTCTTTTTCCAATGAAAGCAGCAGCCTGAACTCCATAGAAAGCAATAGTGCCTTAATTCCACTTGCTGACACAAATGCCAAAAAGATATCTCAAGAATCTGTGACAAACATGGCCTCAAGCTTTGGAGATTTCTCTTATCCAAATGAATTTGATCAAGAAACAATCTGGGATTGGAGCTGCAGTGAACTTGCTGCTATATTTAACAGTCCATTAAAGGTTGAAGATACAGACAGTTCAAGCCGTGGGATAATTTCCCAGGCTGCGACTACTTCATCAACCACCTATGCCCCATCACTTCCTTCGTTTGATGTTGATTTGGCTTACACACTCTTCTGA 858 0.4324 MGSSLLQSNPSSLGERRGRRKQGEAGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGSQARTNFVYTDNTTFDTTLLCPFDVQLQSLFNTTQMKPSTNQNSPPQLSETYSQAGTNAASDSSSAQVGDNLFFFSNGDSKSGYLECIVPDVCFRPSSSFSNESSSLNSIESNSALIPLADTNAKKISQESVTNMASSFGDFSYPNEFDQETIWDWSCSELAAIFNSPLKVEDTDSSSRGIISQAATTSSTTYAPSLPSFDVDLAYTLF 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1174 285 PRINTS Ethylene responsive element binding protein signature 50 66 IPR001471 GO:0003700|GO:0006355
Prci4g1174 285 PRINTS Ethylene responsive element binding protein signature 28 39 IPR001471 GO:0003700|GO:0006355
Prci4g1174 285 MobiDBLite consensus disorder prediction 112 141 - -
Prci4g1174 285 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 20 188 - -
Prci4g1174 285 CDD AP2 27 83 IPR001471 GO:0003700|GO:0006355
Prci4g1174 285 MobiDBLite consensus disorder prediction 14 28 - -
Prci4g1174 285 MobiDBLite consensus disorder prediction 1 28 - -
Prci4g1174 285 Pfam AP2 domain 30 76 IPR001471 GO:0003700|GO:0006355
Prci4g1174 285 Gene3D AP2/ERF domain 27 85 IPR036955 GO:0003700|GO:0006355
Prci4g1174 285 ProSiteProfiles AP2/ERF domain profile. 27 84 IPR001471 GO:0003700|GO:0006355
Prci4g1174 285 FunFam Ethylene-responsive transcription factor 2 27 85 - -
Prci4g1174 285 SMART rav1_2 27 90 IPR001471 GO:0003700|GO:0006355
Prci4g1174 285 SUPERFAMILY DNA-binding domain 28 84 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1174 Prci-Chr4 9219555 9220806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1174 1 172 AP2-EREBP Transcription Factor Family AT5G18560 44.053 7.63e-50 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci4g1174 AP2 1.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1174 - - pcin:129309284 545.043