Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1167 ATGCCCACACTAAAAATCCTCCATATATCCGTCACAGTGATGGGCTTGAACAGTGCACTGCTTCTGAAACTGGTATTGCTGGTCGTCTGCACGGCGGCCGTCTCCGCTGCCCAAACCAAAGCTGGTTGCAGCAGCTCGTGTGGGAACGTGAGCATCCCCTATCCCTTTGGAACTAGCAAAAGCTGCTACATCGACCAAAGGTTCTTTATCAACTGCACAACCACGTCGTCTGGAGAACCCATAGCGTATTTGACTCGCAGCAGTATACCAGTTCTCAACATCTCCCTGGATCCTGCTGAATTGACCGTCTCGGCAGACGTTTCCAGGAATTGTTATGACTCCAAGAGAAATGATTCATGGTACTCAATGTGGTTTGGGAAGTTCACTATATCCAACACAAAGAACAGATTCACTGTGGTGGGCTGTGACACCTACGCCCACATCAGAGACTTGGACGGAAGCAGGTTTCAAACTGGCTGCTCGTTGAGCTGCAGTAACAAGACTACCTTTGAGAACGGGTCGTGCTCTGGTGTGGGATGCTGCCAGACCAGTTTTCCCAAAGCCATCAGGAACTATACTATCACCTTAAGAACTTATGACAAGTACGAGGATGTCTGGGACTTCAACCCTTGCGGCTATGCATTTCTCGCCCAGGAAGGATCCTTCAACTTTACATCTCAGGACCTCCTTAATCTCAGCAACAGAACAAGGTTTCCTGTCGTCATTGATTGGGCTGTTGACAATCGGACATGCGACGAAGCCAAGAATACTCTAAGCAGTTATGCCTGCAAGCAGAACAGCAAATGCCAGGACTCAGTGAGTGGTAATGGGTACCTTTGCGTATGTGAAGATGGCTTCAAAGGCAACCCCTACCTCTCTGACCCCGATTCTGGCTGCAAAGATACTAATGAGTGCGCCAGGCAGAATAACTGCAGCATGAGGTGCCACAACCACAATGGTGGCTATACTTGTTCTTGTCCGCTGTGGTATAGAGGCGACGGCTATGTTAACGGCTCAGGCTGCAAATTCCCTGTCTTGGAAATTTCATTAGGCATTTCTATAGCCTTACTTGTTGTCTTCACACTGGTGTCCACACTATGTTGGGGTCACAAGCAAAGAGCACTGATACAACTTAGGAGAAGATACTTTGAGCAAAATGGGGGGAATATGTTACAACAGCTTCACCACCAACAAGGATACACGGATAGAACCAAAATATTTACTGAAGAGGAGCTTAAAAATGTCACAAACAACTTTGATGAAAGCAGGATCCTTGGTCGTGGAGGACAAGGCACGGTTTACAAAGGCATATTACCAGATAGCACACCTGTTGCCATTAAAAAATCCAAAATAGGAGGAGGTCCCGAACAAATTAAGGATTTTATAAATGAAGTGGCTGTGCTTTCTCAAATTAACCATAGAAATGTAGTTAAACTTCTTGGGTGCTGTCTTGAAACAGAAATTCCTTTGTTAGTTTACGAATTTGTGGACAATGGCACCCTTCTTTCCCATATAGACCCACTAAAGAATGAGCACTCTCTTTCGTGGGAGACTCGATTAAGAATAGCTGCAGAAACAGCTGAAGCTATTTCATATTTACATTCTGCTGCTTCTATTCCAATCATTCATCGAGATATTAAATCTGCCAACATATTATTAGATCATGATTATAGAGCAAAAGTTTCTGACTTTGGGGCTTCAAGACTTGTTCCACTTGATGAAATTCAAGTTACTACTATGGTTCAAGGGACACTAGGATATCTAGATCCAGAGTACCTTCTTACAGGTCTGTTGAATGAAAAAAGTGATGTTTATAGCTTTGGGGTCGTGCTTGTAGAGTTACTCACTGGGAATAAAGCTGTTGAATTCAGTAGGCCAGAACAGAGAAATTTGGCAATGTACTTCATGGCTTCAATGAAAGAAGACAAGTTATGGGAGATTCTTGACAAGCGAGTGTTGGATCAGAAGAATGCAGAACAACTAAAGGAAGTTGCTTTCTTAGCAAGGAGGTGCATTAGAGTTAATGGAGAGGAAAGGCCAACTATGAAAGAAGTAGCGATGGAATTAGAAGGTTTGATTGCCATGGAAAAGCATCCTTGGGTAAAGGGCAAGGATATGGTGTCAGAAGAATGTGAATACTTGCTTGGTCATATTGCTGATGGATATGGGAATGCTAGTGCTAGCAATTCAACTAGCTATGATACCATACAGAAACAAATTGCATTTGAGATTGCAGATGGACGGTGA 2247 0.4393 MPTLKILHISVTVMGLNSALLLKLVLLVVCTAAVSAAQTKAGCSSSCGNVSIPYPFGTSKSCYIDQRFFINCTTTSSGEPIAYLTRSSIPVLNISLDPAELTVSADVSRNCYDSKRNDSWYSMWFGKFTISNTKNRFTVVGCDTYAHIRDLDGSRFQTGCSLSCSNKTTFENGSCSGVGCCQTSFPKAIRNYTITLRTYDKYEDVWDFNPCGYAFLAQEGSFNFTSQDLLNLSNRTRFPVVIDWAVDNRTCDEAKNTLSSYACKQNSKCQDSVSGNGYLCVCEDGFKGNPYLSDPDSGCKDTNECARQNNCSMRCHNHNGGYTCSCPLWYRGDGYVNGSGCKFPVLEISLGISIALLVVFTLVSTLCWGHKQRALIQLRRRYFEQNGGNMLQQLHHQQGYTDRTKIFTEEELKNVTNNFDESRILGRGGQGTVYKGILPDSTPVAIKKSKIGGGPEQIKDFINEVAVLSQINHRNVVKLLGCCLETEIPLLVYEFVDNGTLLSHIDPLKNEHSLSWETRLRIAAETAEAISYLHSAASIPIIHRDIKSANILLDHDYRAKVSDFGASRLVPLDEIQVTTMVQGTLGYLDPEYLLTGLLNEKSDVYSFGVVLVELLTGNKAVEFSRPEQRNLAMYFMASMKEDKLWEILDKRVLDQKNAEQLKEVAFLARRCIRVNGEERPTMKEVAMELEGLIAMEKHPWVKGKDMVSEECEYLLGHIADGYGNASASNSTSYDTIQKQIAFEIADGR 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1167 748 SUPERFAMILY Protein kinase-like (PK-like) 400 686 IPR011009 -
Prci4g1167 748 SMART egf_5 304 342 IPR000742 -
Prci4g1167 748 SMART egf_5 250 300 IPR000742 -
Prci4g1167 748 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 315 326 IPR000152 -
Prci4g1167 748 ProSitePatterns Serine/Threonine protein kinases active-site signature. 541 553 IPR008271 GO:0004672|GO:0006468
Prci4g1167 748 ProSiteProfiles Protein kinase domain profile. 419 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1167 748 FunFam Wall-associated receptor kinase 2 389 495 - -
Prci4g1167 748 Pfam Wall-associated receptor kinase galacturonan-binding 43 103 IPR025287 GO:0030247
Prci4g1167 748 ProSitePatterns Calcium-binding EGF-like domain signature. 301 324 IPR018097 GO:0005509
Prci4g1167 748 SMART serkin_6 419 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1167 748 SMART egfca_6 301 342 IPR001881 GO:0005509
Prci4g1167 748 CDD STKc_IRAK 425 692 - -
Prci4g1167 748 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 32 692 IPR045274 GO:0007166
Prci4g1167 748 FunFam Wall-associated receptor kinase 2 496 712 - -
Prci4g1167 748 SUPERFAMILY EGF/Laminin 301 333 - -
Prci4g1167 748 Pfam Protein tyrosine and serine/threonine kinase 422 689 IPR001245 GO:0004672|GO:0006468
Prci4g1167 748 Gene3D Transferase(Phosphotransferase) domain 1 496 709 - -
Prci4g1167 748 Gene3D Laminin 251 335 - -
Prci4g1167 748 Gene3D Phosphorylase Kinase; domain 1 390 495 - -
Prci4g1167 748 CDD EGF_CA 301 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1167 Prci-Chr4 9139804 9143453 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1167 14 748 Receptor kinase-like Gene Family AT1G21230 46.103 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Prci4g1167 PK_Tyr_Ser-Thr 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1167 - - csin:114268081 821.617