Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1166 ATGGGTTTCAATAGTGCACTACTTTTCAAACTGGTACTGCCATTCTGCACGGTTGCCGCCGCCGCGGCGGTGGCTGCAACCAAACCGGGTTGCAGCAGCTCGTGCGGGAACGTGAGCATCCCCTATCCCTTTGGAACCAGCGAGAACTGCTACATAGACGAAAGGTTCTTCATCAACTGCACAACAATCACGTCCTCATCGGGACAACCAAAAGCGTACCTGAGAGGCGGCGACGTACAAGTCCTCGACATCTCACTGGATATCGGTGAATTAACTGTCTTGGCAGACGTTTCCAAGCATTGCTATGATTATACATATCTACCATGGAACTCCATTGAGTTCGAAAAGTTCACTATATCCAACACGAAGAACATATTCACGGTGGTGGGCTGTGACACCGTCGCTTCCATCAGAGACTTGACAGGGAGCGGCTTTCAAACAGGCTGCATGTTGAGGTGCAATAACGAGAATTTTGAGGTTGAAGATGGATCGTGTTCTGGTGTGGGTTGCTGCCAGACCAGTTTCCCCAAAGCCATCTGGAACTACAATATCAGCCTCAGTAGTTTTAACAACTACAAGGACGTGAGGGACTTTAACCCCTGTGGCTACGCGTTTGTTGCCAAGAACGGATCCTTCAACTTCTCCTATCAACAACTCCTCAATCTAAGCGGCACGACTGAGTTTCCCGTCGTTATGGATTGGGCTGTTGAGGATCAGACATGCGATGAAGCCAAGAAAAATACAAGCAGATCATTTGCCTGCAAGCAGAACAGTAGATGCCAAGATTCAATAAGTGGCGCTGGCTACCTCTGTTTCTGTGAAGATGGGTTCCAAGGTAACCCCTACATGTCTGACCCCGATTCAGGTTGCAAAGATATTGATGAGTGCGAGGGAGAGAATCGGTGCAGTAGGAGATGCCACAACGTGGAAGGCAATTATACGTGTTCTTGTCCGCCGGGATACAGAGGCGACGGCTATAGAGACGGCACAGGCTGCGAGTTCCCTGTCATGCAAATTTCATTAGGCATTTCTATAGCCTTACTTGTTGTCTTTACACTAGTCTCCACACTATGTTGGGGACACAAGCAAAGAGCACTTATACAACTTAGGAGAAGATACTTTGAGCAAAATGGGGGAAATATGCTACAACGGCTTCACCAACAACAAGGATACACCGATAGAACCAAGATATTTACTGAAGAGGAGCTTAAAAATGTCACGAACAACTTTGATGAAAGCAAGATCCTTGGTCGTGGAGGACAAGGCACAATTTACAAAGGCATATTACCAGATAGCACACCTGTTGCCATTAAAAAATCCAAAATAGGAGGAGGTCCTGGACAAATTAAGGATTTTATAAATGAAGTGGCTGTGCTTTCCCAAATCAATCATAGAAATGTGGTTAAACTTCTTGTGTGTCTTGAAACGGAAGTTCCTTTGTTAGTTTATGAATTTGTGGACAATGGCACCCTTCTTTCCCATATAGACCCACTAAAGAATGAGCACTCTCTTTTGTGGGAGACTCGATTAAGAATAGTTGCAGAAACAGCTGAGGCCATTTCATATTTACATTCTGCTGCTTCTATTCCAATTATTCATCGAGATATTAAATCTGCTAACATATTATTAGATCATGATTATAGAGCAAAAGTTTTTGACTTTGGGGCTTCAAGACTTGTTCCACTTGATGAAGTTCAAGTTACTACTATGGTTCAAGGAACACTAGGATATCTAGATCCAGAATACCTTCTTACAGGTCTGTTGAATGAAAAAAGTGATGTTTATAGCTTTGGGGTCGTGCTTGTAGAGTTACTCACTGGGAATAAAGCTGTTGAATTCAGTAGGCCAAAACAGAGAAATTTGGCAATGTACTTCATGGCCTCAATGAAAGAAGACAAGTTATGGGAGATTCTTGACAAGCGAGTGTTAGATCAGAAGAATGCAGAACAACTAAAGGAAGTTGCTTTCTTAGCAAGGAGGTGCATTAGAGTTAATGCAGAGGAAAGGCCAACTATGAAAGAAGTAGCGATGGAATTAGAAGGTTTGATTGCCATGGAAAAGCATCCTTGGGTAAAGGGCAAGGATATGGTGTCAGAAGAATGTGAATACTTGCTTGATCATATAGCTTATGGATTTGGGAATGCTAGCGCTAGCAATTCAGCTGGCTATGATACCATACAAAAACAAATAGCATTTGAGATTGAAGATGGACGGTGA 2217 0.4357 MGFNSALLFKLVLPFCTVAAAAAVAATKPGCSSSCGNVSIPYPFGTSENCYIDERFFINCTTITSSSGQPKAYLRGGDVQVLDISLDIGELTVLADVSKHCYDYTYLPWNSIEFEKFTISNTKNIFTVVGCDTVASIRDLTGSGFQTGCMLRCNNENFEVEDGSCSGVGCCQTSFPKAIWNYNISLSSFNNYKDVRDFNPCGYAFVAKNGSFNFSYQQLLNLSGTTEFPVVMDWAVEDQTCDEAKKNTSRSFACKQNSRCQDSISGAGYLCFCEDGFQGNPYMSDPDSGCKDIDECEGENRCSRRCHNVEGNYTCSCPPGYRGDGYRDGTGCEFPVMQISLGISIALLVVFTLVSTLCWGHKQRALIQLRRRYFEQNGGNMLQRLHQQQGYTDRTKIFTEEELKNVTNNFDESKILGRGGQGTIYKGILPDSTPVAIKKSKIGGGPGQIKDFINEVAVLSQINHRNVVKLLGXCLETEVPLLVYEFVDNGTLLSHIDPLKNEHSLLWETRLRIVAETAEAISYLHSAASIPIIHRDIKSANILLDHDYRAKVFDFGASRLVPLDEVQVTTMVQGTLGYLDPEYLLTGLLNEKSDVYSFGVVLVELLTGNKAVEFSRPKQRNLAMYFMASMKEDKLWEILDKRVLDQKNAEQLKEVAFLARRCIRVNAEERPTMKEVAMELEGLIAMEKHPWVKGKDMVSEECEYLLDHIAYGFGNASASNSAGYDTIQKQIAFEIEDGR 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1166 739 Gene3D Phosphorylase Kinase; domain 1 382 486 - -
Prci4g1166 739 SUPERFAMILY EGF/Laminin 292 325 - -
Prci4g1166 739 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Prci4g1166 739 Gene3D Laminin 295 334 - -
Prci4g1166 739 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 306 317 IPR000152 -
Prci4g1166 739 CDD STKc_IRAK 416 683 - -
Prci4g1166 739 Pfam Protein tyrosine and serine/threonine kinase 413 680 IPR001245 GO:0004672|GO:0006468
Prci4g1166 739 SMART egfca_6 292 333 IPR001881 GO:0005509
Prci4g1166 739 SMART serkin_6 410 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1166 739 Gene3D Laminin 249 294 - -
Prci4g1166 739 SMART egf_5 240 291 IPR000742 -
Prci4g1166 739 SMART egf_5 295 333 IPR000742 -
Prci4g1166 739 FunFam Wall-associated receptor kinase 2 380 486 - -
Prci4g1166 739 Pfam Wall-associated receptor kinase galacturonan-binding 31 92 IPR025287 GO:0030247
Prci4g1166 739 ProSitePatterns Calcium-binding EGF-like domain signature. 292 315 IPR018097 GO:0005509
Prci4g1166 739 Gene3D Transferase(Phosphotransferase) domain 1 487 701 - -
Prci4g1166 739 CDD EGF_CA 292 324 - -
Prci4g1166 739 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 21 683 IPR045274 GO:0007166
Prci4g1166 739 FunFam Fibrillin 2 287 328 - -
Prci4g1166 739 ProSiteProfiles EGF-like domain profile. 292 333 IPR000742 -
Prci4g1166 739 ProSiteProfiles Protein kinase domain profile. 410 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1166 739 FunFam Wall-associated receptor kinase 2 487 703 - -
Prci4g1166 739 SUPERFAMILY Protein kinase-like (PK-like) 391 677 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1166 Prci-Chr4 9113943 9117220 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1166 8 739 Receptor kinase-like Gene Family AT1G21230 45.430 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Prci4g1166 PK_Tyr_Ser-Thr 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1166 - - vvi:100252663 774.622