Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1158 ATGTTTAATTTCCAACGCCTCCAAGCCCTGCTATGGAGGAAGGGTATTTTCGAAAAATCACCAACCCTGCAATGCTACCCATCACCAGCATTCTCTCTCAAATTTAGCACAGGTAATCACTCGTTTACGGTATCATACCTCATTAAAAGTTTAGGGTTTTCCCAAGAAGCTGCCTTAAATGTTTCCAAGAAAGTTCGATTCCAGACCTCAGAGAAGCCGGATTCTGTAGTCAGCTTCTTCAGAAGCCTTGGGTTCTCTGAATCTCTCATAAACGATCTCATTAGAAAGGATCCGGCGCTTCTTCTGTGCGATCCCCAAAAAAGGATTTTGCCTAAGTTTGAATTTTTCCTCTCAAAAGGTGCTTCTAACTCCGACATTGCCATCATGATGCACAAGAGTACGAGATTCCTGGAGAGAAGCTTGGCGAATCACATAATCCCGTCATATGAATTGCTGATACGATTTTTTCAAACTGATGAAGGCGCCGTTGATTTTATAAAAGGCTATCCAGATATTCTTTATGACACTCGAGCGATACAATCTATCAACTTGCTGCTTAAGAATGGAGTTTCAGGAACGAGCGTTGCTCTCATAATGAGAAGGAGGCCTCGTTCACTGTTCTGTGCAGATGATCTTATAAAGGTGGTAGAGGAAATTAAGTGTTTGGGTGATCCTTTGAGTGCAACATTTGGTGTCGCATTGTTAGCCAAAATGTGTATGAGCAAGTCCAGCTGGGAAGCCAAAGTTGATGTCTACAAGAGATGGGGATGGTCTGAAGAAGCTTGGTCAGAAGCATTTAGGAAGCAACCGCACTGTATGTTAGCATCCAAGGATAAAATTGATGCAGTTATGAGTTTTTGGAGTAACATTTGGGTTGAAGGAAAAGATCATCTCAAGGACAGAACTGAGCGGGAAAAATGGAAATCATCCTTATGCTATCCTGATTGGGTCATTTTAATTGCTGTGCAGAATTTCAAATGCTTTATCCGAGCCTATTTATACGAAACAAATGACAGGCTTACAGATATTGTTGAAGAGCATGCAGTTGCTTACTATAAATGTACGAATTCAGATATTTATTTCTCAACATGGGTTGTTGTCTGTGATCGAGCAAACTGCTCACTCTGGGTCCTTTTACAACTGCGGAATCTCGCGAAAGAACCAATCTGTAAGGAAGATGGAGCCTTCAGTGAGGTCACTATCCCTCTGTTTACTTACTATTCAAATCCGAAGCTCATGATTAATTCCCAGCGCCTCAAAACCCTTCTATGGCTGAAGGGTATTCTCAATACATATCTGAACTCACAATACTCTCGACTCTTACAAAGCTACCCTTCACCGACTCTCTCTCTCAGCTACGGCGCAATTGCTTCTCCAGGTAATCACTCGTTCACCGTATCGTACCTCATTAACAATTTAGGGTTTTCCTATGAAGCCGCTTTAAAGGCCTCCAAAACAATTCGATTTGAGACTGCACAAAAGCCAGATGCAGCTGTCAGCTTTTTTCGAAGCCACGAATCCGAGATTCTTACTAAGAAGCTTGAAGAATCAATAATCCCATCATATGGATTTCTCGGAGGGTTCTTCAACAACGATAAAGGGATAATCGATTCTATAAAACAATATCCTAATATGCTTTATTGCACTCGGGTGCTTCTAAGTATCAACTTGTTGCTTGAGAATGGAGTGTCGGGGACAAATATTGCTCTCATAATCTATAGGAGGCCTCGTGTACTCCGAAAGCCAAGTGACCTTGTAAAGGTAGTAGATGAAATTAAGGCTATGGGATTTAGTCCTTCGAAAACACAATTCGGTGTAGCATTGATAGCCAAAATGAGCGTAAGCAAGTCCCATTGGGAAGCCAAAGCTGATGTCTATAGGAGGTGGGGATGGTCAGAGGAGGCATTGTTGAGAGCATTCAGGAAGCAACCACATTTTTTTTGGGTTAACCAGTTGGGTTGGGATTCTTTGCTCCTGGCTGAAGATCCAAGACTCTTCGGATATAGCTTGAATAAGAGGACTATACCAAGGGGTACAGTTCTACGGTATCTTCGCTCAAAAGGTTTAATGAGCAAGGATTCGAGCTTATTCTTCCCATTTGGTATTTCTGAAAAGCAATTCCTCGAAAGATACGTGAATTGTTTTGAGAAGCGTGATGATCAGATATTGAAGCTCTATGAAGAACATTTGAAGAATGATGGCATGTCATGA 2211 0.417 MFNFQRLQALLWRKGIFEKSPTLQCYPSPAFSLKFSTGNHSFTVSYLIKSLGFSQEAALNVSKKVRFQTSEKPDSVVSFFRSLGFSESLINDLIRKDPALLLCDPQKRILPKFEFFLSKGASNSDIAIMMHKSTRFLERSLANHIIPSYELLIRFFQTDEGAVDFIKGYPDILYDTRAIQSINLLLKNGVSGTSVALIMRRRPRSLFCADDLIKVVEEIKCLGDPLSATFGVALLAKMCMSKSSWEAKVDVYKRWGWSEEAWSEAFRKQPHCMLASKDKIDAVMSFWSNIWVEGKDHLKDRTEREKWKSSLCYPDWVILIAVQNFKCFIRAYLYETNDRLTDIVEEHAVAYYKCTNSDIYFSTWVVVCDRANCSLWVLLQLRNLAKEPICKEDGAFSEVTIPLFTYYSNPKLMINSQRLKTLLWLKGILNTYLNSQYSRLLQSYPSPTLSLSYGAIASPGNHSFTVSYLINNLGFSYEAALKASKTIRFETAQKPDAAVSFFRSHESEILTKKLEESIIPSYGFLGGFFNNDKGIIDSIKQYPNMLYCTRVLLSINLLLENGVSGTNIALIIYRRPRVLRKPSDLVKVVDEIKAMGFSPSKTQFGVALIAKMSVSKSHWEAKADVYRRWGWSEEALLRAFRKQPHFFWVNQLGWDSLLLAEDPRLFGYSLNKRTIPRGTVLRYLRSKGLMSKDSSLFFPFGISEKQFLERYVNCFEKRDDQILKLYEEHLKNDGMS 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1158 736 SMART mt_12 14 54 IPR003690 GO:0003690|GO:0006355
Prci4g1158 736 SMART mt_12 91 122 IPR003690 GO:0003690|GO:0006355
Prci4g1158 736 SMART mt_12 263 293 IPR003690 GO:0003690|GO:0006355
Prci4g1158 736 SMART mt_12 127 163 IPR003690 GO:0003690|GO:0006355
Prci4g1158 736 SMART mt_12 536 564 IPR003690 GO:0003690|GO:0006355
Prci4g1158 736 SMART mt_12 656 690 IPR003690 GO:0003690|GO:0006355
Prci4g1158 736 SMART mt_12 569 598 IPR003690 GO:0003690|GO:0006355
Prci4g1158 736 FunFam Mitochondrial transcription termination factor-like 514 718 - -
Prci4g1158 736 Gene3D Transcription termination factor 3, mitochondrial 38 214 IPR038538 -
Prci4g1158 736 Gene3D Transcription termination factor 3, mitochondrial 476 718 IPR038538 -
Prci4g1158 736 Pfam mTERF 77 293 IPR003690 GO:0003690|GO:0006355
Prci4g1158 736 PANTHER CGI-12 PROTEIN-RELATED 40 289 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1158 Prci-Chr4 8995340 9001920 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci4g1158 mTERF 2.8e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1158 K15031 - gmx:102667698 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g1158 4 8995340 9001920 Prci4g1158 4 8995340 9001920 ECH