Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1148 ATGGCTAGTCCTGAGGGAGAACTTAAAATAAGTTTTGGCTATCAATGCAATAATAATAGAGTTTCCTCTTCTAATTTAATCGATAACTATAAAATCCTGCCTGCACTCCGTAAAACAAGCAGCTTTTCTTGCTTGTCTGGTGCAGCCTTAAGTGCCAATGCTACATTAGCCAACACTAGCATCTGCGATGGTGTTATAGGGGAAGAAATCCTTCCAAGCTGGGACTCCCCTAATATGTTCCGTAAGATAGCCTCTTCTTCAAGCCTTTCAAGGTTGGATATGTTGTCATCTTCTCTCCAAAGTAGTTTGTCAAATTTAAGTTGCAGTCCATCCACCCCGAGTAATATGCTTGAACATGACTCTTGCACTATAAGATCCACTATTGCTCCTTCCAGAAGTGAAGGTTTTCTTAATGCCATGGAAGTACAAGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTCTGTTCTGAAGAAAATGGGTGGCTCTTTTGTGCTATTTATGATGGCTTTAACGGGAGAGATGCAGCTGACTTTCTGGCTGGTACCCTGTTTGACACAATTTCATCTTATTTTAATAAGTTATATTCGGAATTGGAGACAGATTCCGTCTGTTCTTCTAACAATATGGGTTTGGGTGGATCAGTCCAATATAAGTTGGATGATAGACTTCATAATTGTGACAAACCATCATTTTCAGATGGGGTAGTTGATTGCCTGCAGCGTGCTCTTAGTCAGGTTGAGAACGATTTTTTACACATGGTTGAACAAGAAATAGAGGATCGCCCGGACTTGGTTTCAATTGGATCTTGTGTTTTACTTGTGCTTCTTCATGGGAATGAATTGTATACACTTAATCTTGGTGACAGCAGAGCAGTATTGGCAACAAGCAGTTGTGAATCAAACGGGGGTGGAAAACTCAAAGCTATCCAGCTTACAGATAGTCACACGGTTGAAAATGAAGCTGAGAGAGCTCGGCTTCTGGCTGATCATCCGGATGATCCTATGACCATTGTGTCAAGAAGAGTGAAAGGAAAACTGAAGGTTACTCGCGCATTTGGAGTTGGCTACTTGAAAAAGAAAAGTCTGAATGATGCATTGATGGGAATCCTTCGGGTTCGTGATCTTAGAAGCCCTCCATATATTTCCACTGAACCATCATTACGTGTGCATAAGATCTCAAATTCCGATCATTTCGTCATAGTGGGGAGTGATGGTTTATTTGATTTCTTCAGTAATGATGAGGCAGTGGAGCTTGTAGAGTCTTATATCCAGAGCAATCCTTTTAGTGATCCAGCAAAATATCTCGTCGAGCAGCTTGTATCAAGAGCAGCTGATTCTGCAGGTTTCAGCATGGAAGAATTGATGAATATTCCGGCGGGAAGGAGGAGGAAGTACCATGACGATGTAACCGTAATTGTGATCATGCTTGGCACGAATCAGCGGACTTCAAAGGCATCAACTTGCATGTGA 1479 0.4192 MASPEGELKISFGYQCNNNRVSSSNLIDNYKILPALRKTSSFSCLSGAALSANATLANTSICDGVIGEEILPSWDSPNMFRKIASSSSLSRLDMLSSSLQSSLSNLSCSPSTPSNMLEHDSCTIRSTIAPSRSEGFLNAMEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLFDTISSYFNKLYSELETDSVCSSNNMGLGGSVQYKLDDRLHNCDKPSFSDGVVDCLQRALSQVENDFLHMVEQEIEDRPDLVSIGSCVLLVLLHGNELYTLNLGDSRAVLATSSCESNGGGKLKAIQLTDSHTVENEAERARLLADHPDDPMTIVSRRVKGKLKVTRAFGVGYLKKKSLNDALMGILRVRDLRSPPYISTEPSLRVHKISNSDHFVIVGSDGLFDFFSNDEAVELVESYIQSNPFSDPAKYLVEQLVSRAADSAGFSMEELMNIPAGRRRKYHDDVTVIVIMLGTNQRTSKASTCM 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1148 492 Pfam Protein phosphatase 2C 224 433 IPR001932 -
Prci4g1148 492 Gene3D - 106 488 IPR036457 -
Prci4g1148 492 SUPERFAMILY PP2C-like 149 480 IPR036457 -
Prci4g1148 492 PANTHER PROTEIN PHOSPHATASE 2C 134 477 IPR015655 GO:0004722|GO:0006470
Prci4g1148 492 ProSiteProfiles PPM-type phosphatase domain profile. 136 479 IPR001932 -
Prci4g1148 492 CDD PP2Cc 149 477 IPR001932 -
Prci4g1148 492 SMART PP2C_4 130 477 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1148 Prci-Chr4 8916808 8920989 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1148 4 490 PP2C-type Phosphatase Gene Family AT3G16560 63.105 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1148 - - gmx:100808304 702.975