Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1146 ATGGAAAAAAGCATGGCTAGTCCTGAGGGAGAACTTAAAATAAGTTTTGGCTATCAATGCAATAATAATAGAGTTTCCTCTTCTAATTTAATCGATAACTATAAAATCCTGCCTGCACTCCGTAAAACAAGCAGCTTTTCTTGCTTGTCTGGTGCAGCCTTAAGTGCCAATGCTACATTAGCCAACACTAGCATCTGCGATGGTGTTATAGGGGAAGAAATCCTTCCAAGCTGGGACTCCCCTAATATGTTCCGTAAGATAGCCTCTTCTTCAAGCCTTTCAAGGTTGGATATGTTGTCATCTTCTCTCCAAAGTAGTTTGTCAAATTTAAGTTGCAGTCCATCCACCCCGAGTAATATGCTTGAACATGACTCTTGCACTATAAGATCCACTATTGCTCCTTCCAGAAGTGAAGGTTTTCTTAATGCCATGGAAGTACAAGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTCTGTTCTGAAGAAAATGGGTGGCTCTTTTGTGCTATTTATGATGGCTTTAACGGGAGAGATGCAGCTGACTTTCTGGCTGGTACCCTGTTTGACACAATTTCATCTTATTTTAATAAGTTATATTCGGAATTGGAGACAGATTCCGTCTGTTCTTCTAACAATATGGGTTTGGGTGGATCAGTCCAATATAAGTTGGATGATAGACTTCATAATTGTGACAAACCATCATTTTCAGATGGGGTAGTTGATTGCCTGCAGCGTGCTCTTAGTCAGGTTGAGAACGATTTTTTACACATGGTTGAACAAGAAATAGAGGATCGCCCGGACTTGGTTTCAATTGGATCTTGTGTTTTACTTGTGCTTCTTCATGGGAATGAATTGTATACACTTAATCTTGGTGACAGCAGAGCAGTATTGGCAACAAGCAGTTGTGAATCAAACGGGGGTGGAAAACTCAAAGCTATCCAGCTTACAGATAGTCACACGGTTGAAAATGAAGCTGAGAGAGCTCGGCTTCTGGCTGATCATCCGGATGATCCTATGACCATTGTGTCAAGAAGAGTGAAAGGAAAACTGAAGGTTACTCGCGCATTTGGAGTTGGCTACTTGAAAAAGAAAAGTCTGAATGATGCATTGATGGGAATCCTTCGGGTTCGTGATCTTAGAAGCCCTCCATATATTTCCACTGAACCATCATTACGTGTGCATAAGATCTCAAATTCCGATCATTTCGTCATAGTGGGGAGTGATGGTTTATTTGATTTCTTCAGTAATGATGAGGCAGTGGAGCTTGTAGAGTCTTATATCCAGAGCAATCCTTTTAGTGATCCAGCAAAATATCTCGTCGAGCAGCTTGTATCAAGAGCAGCTGATTCTGCAGAATGTTCCTACAAGATATATTTACGATGA 1392 0.4116 MEKSMASPEGELKISFGYQCNNNRVSSSNLIDNYKILPALRKTSSFSCLSGAALSANATLANTSICDGVIGEEILPSWDSPNMFRKIASSSSLSRLDMLSSSLQSSLSNLSCSPSTPSNMLEHDSCTIRSTIAPSRSEGFLNAMEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLFDTISSYFNKLYSELETDSVCSSNNMGLGGSVQYKLDDRLHNCDKPSFSDGVVDCLQRALSQVENDFLHMVEQEIEDRPDLVSIGSCVLLVLLHGNELYTLNLGDSRAVLATSSCESNGGGKLKAIQLTDSHTVENEAERARLLADHPDDPMTIVSRRVKGKLKVTRAFGVGYLKKKSLNDALMGILRVRDLRSPPYISTEPSLRVHKISNSDHFVIVGSDGLFDFFSNDEAVELVESYIQSNPFSDPAKYLVEQLVSRAADSAECSYKIYLR 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1146 463 Gene3D - 110 461 IPR036457 -
Prci4g1146 463 ProSiteProfiles PPM-type phosphatase domain profile. 140 463 IPR001932 -
Prci4g1146 463 CDD PP2Cc 153 451 IPR001932 -
Prci4g1146 463 SMART PP2C_4 134 461 IPR001932 -
Prci4g1146 463 PANTHER PROTEIN PHOSPHATASE 2C 134 449 IPR015655 GO:0004722|GO:0006470
Prci4g1146 463 Pfam Protein phosphatase 2C 228 437 IPR001932 -
Prci4g1146 463 SUPERFAMILY PP2C-like 153 450 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1146 Prci-Chr4 8916801 8920674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1146 8 454 PP2C-type Phosphatase Gene Family AT3G16560 61.842 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1146 - - gmx:100808304 626.706