Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1141 ATGCAGAACGAGGAGGGACAGATCACTGAGCTTTACATTCCAAGAAAATGCTCCGCAACAAACAGACTGATCACTGCTAAGGATCATGCCTCTGTTCAGATTAACATTGGCCGTTTGGATGAGAACGGTATCTATAATGGCCATTTTTCTACATTTGCCCTATGTGGTTTCATCCGTGCACAGGCCCGCTTGCCTTATTTGATCACTTATTTATTTATCTGTTTTTGTAGTGCAGCGTTCTATTCTATTACCATATTTTTGTGTCTGTCCTTGGCAAAAAGTAATGTTTTTCAAGAAATGGACTGTATTTTGAATTGA 318 0.3931 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGRLDENGIYNGHFSTFALCGFIRAQARLPYLITYLFICFCSAAFYSITIFLCLSLAKSNVFQEMDCILN 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1141 105 Gene3D - 1 75 IPR038579 -
Prci4g1141 105 ProSitePatterns Ribosomal protein S21e signature. 11 19 IPR018279 GO:0003735|GO:0005840|GO:0006412
Prci4g1141 105 PANTHER 40S RIBOSOMAL PROTEIN S21 1 64 IPR001931 GO:0003735|GO:0005840|GO:0006412
Prci4g1141 105 Pfam Ribosomal protein S21e 1 63 IPR001931 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1141 Prci-Chr4 8887906 8888435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1141 1 72 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 72.222 5.10e-37 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1141 K02971 - gmx:100817753 124.405