Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1122 ATGGACAGTAATAAGGATGAAGCTCTGAGGTGTATCCGCATCGCTGAGGAGGCGATTGCAGCAGGGAACAAAGGGCGTGCCCTTAAATTTATCAAAATTGCACAGCGGCTGAATCGCAATCTGTCAGTGGAAGAGTTACTTACCACATGTGAGAGGCTTGATTCTCAATCATCTACGCATTCTAGGGATGAAAATGGTGTTCATCAGGTTAAGAGGGAACGTGGTTCCAGGCCAAGAGGTTTGAATGGAGAGAGAAATTATACAGAAGAACATGTTCAGTTAGTTAGGGAGATTAAGGGGAAGAACGATTATTATGCCATTCTTGGTGTGGAGAAGACTTCCTCTGTTGAGGAGATCAGGCGGGCTTATAGGAAATTGTCATTGAAAGTTCATCCTGACAAGAATAAGGCACCGGGTTCTGAAGAGGCATTTAAGAAGGTATCCAAGGCTTTTAAGTGTTTAAGTGATGATGGTTCAAGGAGGCAGTATGATCAGACAGGGCTGGTCGAGGAGTTTGAATATAACCAGCAACACAATGTTAGGCGCAGGAGAGGAAGAGCAACTGCACATAACTTTTTTAATGATGACATTGATCCTGATGAGATATTTAGGGCATTCTTTGGAGAAGCAGATGTATTTGGGAGAGCTCATATTTACCGGACAAGGGGAATGGGGAGTCAACAGCGGCAAGAATTTCAAGGTGGAGGGTTCAATATTATGCTCCTTCTGCAAATTGTACCGTTCTTGATAATATTTCTGCTTGCTTACTTGCCATTTTCCGAACCAGACTATTCTTTGCATAAGAATTACTCGTATCAGATTCCCAAGACAACAGACAAGTATGGGGTTGAGTATTTTGTGAAATCTGAATCATTTGAAGATAAATATCCGCGTGGAAGTCCTGCCCGTGCAAATACTGAAGGCAATGTGATACATGATTACAAAAACTTGCTTCGTCGCTACTGTCAAATAGAAGTTCAGAGGCGTAGTTGGAATAGGAATCTGCCAACTCCTTACTGTGAAAAGCTTCAGAAGCTTGGTGTAGCTTGA 1050 0.4257 MDSNKDEALRCIRIAEEAIAAGNKGRALKFIKIAQRLNRNLSVEELLTTCERLDSQSSTHSRDENGVHQVKRERGSRPSXGLNGERNYTEEHVQLVREIKGKNDYYAILGVEKTSSVEEIRRAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFKCLSDDGSRRQYDQTGLVEEFEYNQQHNVRRRRGRATAHNFFNDDIDPDEIFRAFFGEADVFGRAHIYRTRGMGSQQRQEFQGGGFNIMLLLQIVPFLIIFLLAYLPFSEPDYSLHKNYSYQIPKTTDKYGVEYFVKSESFEDKYPRGSPARANTEGNVIHDYKNLLRRYCQIEVQRRSWNRNLPTPYCEKLQKLGVA 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1122 350 MobiDBLite consensus disorder prediction 56 79 - -
Prci4g1122 350 PRINTS DnaJ domain signature 140 160 IPR001623 -
Prci4g1122 350 PRINTS DnaJ domain signature 106 124 IPR001623 -
Prci4g1122 350 PRINTS DnaJ domain signature 124 139 IPR001623 -
Prci4g1122 350 SUPERFAMILY Chaperone J-domain 100 214 IPR036869 -
Prci4g1122 350 ProSiteProfiles dnaJ domain profile. 104 168 IPR001623 -
Prci4g1122 350 Gene3D DnaJ domain 101 220 IPR036869 -
Prci4g1122 350 SMART dnaj_3 103 160 IPR001623 -
Prci4g1122 350 PANTHER AT29763P-RELATED 1 346 - -
Prci4g1122 350 CDD DnaJ 104 157 IPR001623 -
Prci4g1122 350 MobiDBLite consensus disorder prediction 54 85 - -
Prci4g1122 350 Pfam DnaJ domain 104 165 IPR001623 -
Prci4g1122 350 Pfam Domain of unknown function (DUF1977) 261 331 IPR015399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1122 Prci-Chr4 8708763 8711707 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1122 105 165 C2H2 Transcription Factor Family AT1G74250 44.776 5.93e-08 52.4