Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1109 ATGGTGTTCAAATCCCAGTTCTTCTCCCCATATACCTCACCCTCCTTCCTTCTTCCCCCATTCCTATCCAACTCTAAAATGGCCGCCGGCGACCATCCCAATTCCAATTCTAATCCCTTTAATGCCAACGGCTACGCCCTCACCTCCAACATCCTCCTCACCGTCACTCTCATATTAGTCTTCCTCATCCTCCTCCTCATTTCCCTCCACTTCTACGCCCGCTGGTACCTCCGCCGTGCCCGCCTTCGTCACCGCCAGCGCCGCCGTTCCCATCTCGTCTTCTACGTCGACTCCCTCACCCCCGACGCCCCCCCGCCCATCGGCCTCGATCCCTCTGTCATTCAGTCTGTTCCTGTCTTCGTTTATTCCGCCCACTCCGACCCCGCCGAATGCGCCGTGTGCTTGTCCGAGTTCCAAGAGAACGAATCGGGTCGGGTTTTGCCCAAATGTAACCACACTTTTCACGTCGAATGCATCGACATGTGGTTCCAGTCCCACTCAACCTGTCCGCTCTGTAGATCTTTGGTTGAAACCCGTCCGACCTGGGGACCTGCCCCGACCGGAAGTGGTGATCGATGTTGGTTCGAGTTCGGGGTGCCACCAGGAAGGAGAAGAAGACAACCGGAGCGGGCGGAGGCTCTGTAG 645 0.5736 MVFKSQFFSPYTSPSFLLPPFLSNSKMAAGDHPNSNSNPFNANGYALTSNILLTVTLILVFLILLLISLHFYARWYLRRARLRHRQRRRSHLVFYVDSLTPDAPPPIGLDPSVIQSVPVFVYSAHSDPAECAVCLSEFQENESGRVLPKCNHTFHVECIDMWFQSHSTCPLCRSLVETRPTWGPAPTGSGDRCWFEFGVPPGRRRRQPERAEAL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1109 214 CDD RING-H2_EL5-like 130 173 - -
Prci4g1109 214 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 178 IPR013083 -
Prci4g1109 214 SUPERFAMILY RING/U-box 130 180 - -
Prci4g1109 214 Pfam Ring finger domain 130 173 IPR001841 -
Prci4g1109 214 SMART ring_2 131 172 IPR001841 -
Prci4g1109 214 ProSiteProfiles Zinc finger RING-type profile. 131 173 IPR001841 -
Prci4g1109 214 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 45 177 IPR044675 -
Prci4g1109 214 FunFam RING-H2 finger protein ATL3 102 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1109 Prci-Chr4 8555814 8557209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1109 36 178 Rapid Response to Elicitors AT3G16720 53.947 2.18e-46 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1109 - - pcin:129310038 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g1109 4 8555814 8557209 Prci4g1109 4 8555814 8557209 ECH