Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1108 ATGGCCAACGGTGACCATGAAAGGAAGAAGATCGCCGTTATCTGGCTATCTGGGATCCTCCTAGTGGCCATGGTGGCCTCCGTGGGCGCCGGCGACCTGGAAATGCTTTGCGGCTCAGCCCAATACAAAGAAACCTGCAAGCACAGCCTCTCAAAAGCAAACAACGGCTCCGCCGACGTTAAAGAACTCATCAAAACGGCTTTCCAGTCCACCGCCGAGGAGTTCAAGAGGTTCATCGACAACTCCACCCTCTTCCAAGAGCTAGCCAAGGACAACATGACCAAACAGGCTATGGAGATCTGCCACGAGGTGCTGGACTACGCCATAGACGACGTACAGAACTCGATCAATCGTGTGGATCAATTCGATATAAGCAAGCTCAGAGACTACGCCTATGACGTTAAGGTGTGGCTCGGAGGCACCATTTCCCACCAACGCACCTGCTTGGACGGCTTCGAGAACACCACCACTCACGCCGCCGAGACGATGGCCAAGGTCTTGAACACCTCCCTGGAGCTTAGCATGAACGCTTTGGACATTATCTCTGGCCTCTCCGAGGTGGCCGAAACCTTTGGATTCTTTGGCCTCCTCGGCGGCCAGCAGGATCATGGTAATAACAACACCTCCAGTCGGAAGCTTCTCGAGAGTTCGCCGTCGTGGTTAAGTGATAGCCAACACCGTCATCTCCTCGCCGCGGCCGCTGCCGGTGCTGCCAACGTCAAGCCCGATGCTGTTGTGGCTCAAGATGGAAGTGGGCAGTTCAAAACACTCACCGACGCTATCAAGTCTGTTCCGAAAAATAACATGAAACCCTATGTGATTCACGTGAAGGCCGGCGTATATAAGGAGATTGTGAATATTCCCAAGCAAGCCAGTTATATCACTATCGTCGGAGATGGTCCCACAGTCACCAGATTCACGGGCGCTCTCAGCTATGCCGACGGCGTCCAGACTTACAACACCGCAACATTCGGCGTGAATGCTCCTTACTTCACGGCCATGCACGTAGGGTTCGAGAACACGGCCGGAGCAATTAAGCACCAAGCCGTGGCGCTCCGAGTGACGGCAGATAAAGCCGTCTTGTTCAACTGCCACATGGACGGGTACCAAGACACCCTCTACGCGCAGTCTCACCGCCAGTTCTATCGCGACTGCGTCATCTCCGGTACAATTGATTTCATCTTCGGTGACGCTGAGATGGTCTTCCAGAACTGCACACTGGTTGTAAGGCCACCTTTAAGCAACCAGAACAGCATCGTCTCCGCCAGCGGCCGCAACGTGGCCAACAGCCCCAGCGCCATGGTGTTCCAGAGCTGCCGCTTCACCGCGGACCCACTCTACCTCTCGGACCCGGAGAAGAAGCCGGCATACCTAGGGCGACCATGGAGGGCATACGCGAAGGTGGTGACCATGGATTCTGAGATCGACGGAATCTTCGCTCCTGAAGGTTACATGTCGTGGATGGGAAGCATCTATCACTTGACCAGCATCTTCTACGAGTATAACAACAAGGGTCCCGGCGCCAATGCCTCTCACAGAGTGAAATGGCCCGGCGTGAAAGTGATCACTGCTTCGGAAGCTGCAAATTTCTATCCTCGCAAGTTCTTTGAATTCCGCAATGCAACCACAACCGAAGACGATTCCTGGGTCTCCACCTCTGGGGTTCCCTACTCCTTTGGCCCCATGGCCGTTCCCAATTGA 1701 0.5467 MANGDHERKKIAVIWLSGILLVAMVASVGAGDLEMLCGSAQYKETCKHSLSKANNGSADVKELIKTAFQSTAEEFKRFIDNSTLFQELAKDNMTKQAMEICHEVLDYAIDDVQNSINRVDQFDISKLRDYAYDVKVWLGGTISHQRTCLDGFENTTTHAAETMAKVLNTSLELSMNALDIISGLSEVAETFGFFGLLGGQQDHGNNNTSSRKLLESSPSWLSDSQHRHLLAAAAAGAANVKPDAVVAQDGSGQFKTLTDAIKSVPKNNMKPYVIHVKAGVYKEIVNIPKQASYITIVGDGPTVTRFTGALSYADGVQTYNTATFGVNAPYFTAMHVGFENTAGAIKHQAVALRVTADKAVLFNCHMDGYQDTLYAQSHRQFYRDCVISGTIDFIFGDAEMVFQNCTLVVRPPLSNQNSIVSASGRNVANSPSAMVFQSCRFTADPLYLSDPEKKPAYLGRPWRAYAKVVTMDSEIDGIFAPEGYMSWMGSIYHLTSIFYEYNNKGPGANASHRVKWPGVKVITASEAANFYPRKFFEFRNATTTEDDSWVSTSGVPYSFGPMAVPN 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1108 566 SMART PMEI_2 28 180 IPR006501 GO:0004857
Prci4g1108 566 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 185 IPR035513 -
Prci4g1108 566 Pfam Pectinesterase 243 536 IPR000070 GO:0030599|GO:0042545
Prci4g1108 566 Pfam Plant invertase/pectin methylesterase inhibitor 35 180 IPR006501 GO:0004857
Prci4g1108 566 ProSitePatterns Pectinesterase signature 1. 268 287 IPR018040 -
Prci4g1108 566 Gene3D - 240 562 IPR012334 -
Prci4g1108 566 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 184 IPR035513 -
Prci4g1108 566 SUPERFAMILY Pectin lyase-like 240 559 IPR011050 -
Prci4g1108 566 CDD PMEI-like_3 36 185 - -
Prci4g1108 566 FunFam Pectinesterase 30 185 - -
Prci4g1108 566 PANTHER PECTINESTERASE 16 551 - -
Prci4g1108 566 FunFam Pectinesterase 4 240 561 - -
Prci4g1108 566 ProSitePatterns Pectinesterase signature 2. 387 396 IPR033131 -
Prci4g1108 566 NCBIfam pectinesterase inhibitor domain 14 184 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1108 Prci-Chr4 8545255 8547328 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1108 7 563 Carbohydrate Esterase AT3G05610 41.623 4.66e-164 481