Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1103 ATGAATTCGAATTGTGGCAAATCCAATCAACAGAAAGGTTCCTCAGCCGCTTTGAACAACTTCAATTTCGACTTTGATCTTGGGATCGGATCGAATCGACCCAAATCTCTCAACGACCAGAAAAACCATACCTCGTCCAATTCATTTTTCACTTCTTCCTCCTCCACATTTTCGTCTACTCAACCAAGACCCGCTTGGCAACTAAGCAAGCCATCATGGACTCACCAGCCGGTGCCCAGTCTGGCGGCTCAGCCCGGCTTGCCGAATGGGCCCGTTTCAATGGTTGGGGATGTATTCGGCAGGAGCTGGGGATCGACTCAACCTTCGGCTTCGAAATCGAGCATCGGACCTATTAATAAAGATCCTAATCTCTTTGGGGATTTGGTAGGTTCTGCTTTAGGGCAGAGTTCAAAGAGTAGTAGCAATGTTCCCCTGAAAAATGGGGCGCCTTTCGAAGGCGTCTGGTACACATCGAACAAGAGTCCTTTTTCTATGGAGAACATGGCGGATTCTTTGCCTAAAACTGGCGGTACAGTTCAAAGTAGTGGAAGTTGGGGATCTTCTGGGAATATGGGGAACTATCCTAGCGGCTACAATGGTAATAGTGGCACGAGTTTCAATAAGAGTACCAATCTTGGTGGTCCTTCGTTGCGCACCATGAATGTTGGAGGTGGTGTAGCTGGAAATGGAATGAGTTCTAATAAAGATCCATTTGGTTCTTTGGCTGGTTTTGGATCCAAACAATCTGGTAGTCTTAATTCAGCTAGCAAAGCAAAGATAATGAATAATGATACAGGGGATGATGGTTTTGGTCATTTTCAGAGTGGTTCCAAACCGAGCTCTTCTACATTCCTATCAAGTAGTTCAACAAAAAATGGTATCAATCTTAATTGATCTGCGTCTTTGAGTCAAAAGCCCTCGCAAACTTCTAGGGGCGATCCGTTGGACATGTTCTTCTCAACTTCCTCAGCCACAACTGGAAGTGCTGCTGTGGCTTCTGAAGGATTTGGAGGACAGCCCTCTTCAGAAGTTGATGATTGGGGCTTAGATTCTGAATTTGGTGGGGGAGGCCATGATGTGGGTGATACAACCACTGAGCTTGAAGGACTTCCCTCTCTTCCTGCTGGTATGTCTGGTTCTGCAGCAAAAAGCAAAGGGATGGACAATTACAAGCAGGGACAATTTGCTGACGCTAGAAAGTGGCTTTCCTGGGCTATGATCCTTCTTGAGAAAGCAGGTGATAATGCAGGCACTACGGAAGTTTTGTCATGCAGGGCTTCATGTTTCAAAGTAGTTGGGGAGTATAAGAAAGCAGTAGCTGATTGTACAAAGGTGCTTGAGAACGATGAAACAAATGTATCTGTTCTTGTACAGCGTGCTCTTTTGTATGAAAGCATGGAAAAGTACAAACTTGGTGCTGAAGACCTGAGGACTGTTCTGAAGATTGATCCTTCCAATAGAGTTGCAAAAAGTACCATTCACAAGTTGAATAAGATGGCTGATTAG 1506 0.4515 MNSNCGKSNQQKGSSAALNNFNFDFDLGIGSNRPKSLNDQKNHTSSNSFFTSSSSTFSSTQPRPAWQLSKPSWTHQPVPSLAAQPGLPNGPVSMVGDVFGRSWGSTQPSASKSSIGPINKDPNLFGDLVGSALGQSSKSSSNVPLKNGAPFEGVWYTSNKSPFSMENMADSLPKTGGTVQSSGSWGSSGNMGNYPSGYNGNSGTSFNKSTNLGGPSLRTMNVGGGVAGNGMSSNKDPFGSLAGFGSKQSGSLNSASKAKIMNNDTGDDGFGHFQSGSKPSSSTFLSSSSTKNGINLNXSASLSQKPSQTSRGDPLDMFFSTSSATTGSAAVASEGFGGQPSSEVDDWGLDSEFGGGGHDVGDTTTELEGLPSLPAGMSGSAAKSKGMDNYKQGQFADARKWLSWAMILLEKAGDNAGTTEVLSCRASCFKVVGEYKKAVADCTKVLENDETNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRVAKSTIHKLNKMAD 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1103 501 PANTHER OS03G0340700 PROTEIN 1 501 - -
Prci4g1103 501 MobiDBLite consensus disorder prediction 268 332 - -
Prci4g1103 501 MobiDBLite consensus disorder prediction 100 118 - -
Prci4g1103 501 MobiDBLite consensus disorder prediction 33 79 - -
Prci4g1103 501 MobiDBLite consensus disorder prediction 1 118 - -
Prci4g1103 501 SUPERFAMILY TPR-like 381 492 IPR011990 GO:0005515
Prci4g1103 501 MobiDBLite consensus disorder prediction 1 21 - -
Prci4g1103 501 ProSiteProfiles TPR repeat profile. 453 486 IPR019734 GO:0005515
Prci4g1103 501 MobiDBLite consensus disorder prediction 167 217 - -
Prci4g1103 501 MobiDBLite consensus disorder prediction 167 378 - -
Prci4g1103 501 SMART tpr_5 419 452 IPR019734 GO:0005515
Prci4g1103 501 SMART tpr_5 379 412 IPR019734 GO:0005515
Prci4g1103 501 SMART tpr_5 453 486 IPR019734 GO:0005515
Prci4g1103 501 Gene3D Tetratricopeptide repeat domain 378 500 IPR011990 GO:0005515
Prci4g1103 501 MobiDBLite consensus disorder prediction 244 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1103 Prci-Chr4 8432944 8435479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1103 378 498 Calmodulin-binding Proteins AT3G25230 30.534 4.42e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1103 - - pcin:129293443 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g1103 4 8432944 8435479 Prci4g1103 4 8432944 8435479 ECH