Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1102 ATGTGTGGTGGAGCTATCATTTCCGATTTCATTGCCGTCAAGCGAGGCCGGAAACTCACCGCCGGTGACTTCTGGTCCGAGCTCGACCCTTTCTCCGACCTCCTTGGCTTCGATATTAACGCCGGTTCTGCCAAAAACCAAACGCCTCGGAAACTCCCTCAAGTCCCAATCAGTAAAGAGGCAGGCGAGAAGAAGGAGAAGAAAAGCGTTAGCGCAGAGAAAGCAGGCGGGAAGAGCACTGGACAGAGAGCACGCAAGAACGTGTACAGAGGAATAAGGCAGAGGCCGTGGGGCAAGTGGGCCGCAGAGATAAGGGACCCACACAAGGGCGTCCGGGTGTGGCTCGGCACCTACAACACCGCCGAAGAAGCCGCCAGAGCCTACGACGAAGCGGCCAAGCGCATCCGCGGCGACAAAGCCAAGCTCAACTTCCCGGCCGCTACCGCCCCGAGTCCTCAGCCGGAGCGACCCGCCAAGAAGCGGTGCCTGAGCCCAGAGCTGAGTGACGGGAGCAACCATCCAACCGGGCCACCGACGCCGTACCAGGCGGATCTGGAGCTGAAGCAGCAGATATCAGACCTGGAGTCGCTGCTGGGACTGGAGCCCGAGGAAGAGACGAGCGAGCAGCAGCAGGCGGTGAGCGGAGGAGGGAGCAGCGACGGCGACGAGTGGGCGGAGTCGGTGGAGATGTGGATGCTGGACGACGTCGTGTTGAATCACATGGCAAATAGTGAGCTCTTGTACTGA 747 0.6051 MCGGAIISDFIAVKRGRKLTAGDFWSELDPFSDLLGFDINAGSAKNQTPRKLPQVPISKEAGEKKEKKSVSAEKAGGKSTGQRARKNVYRGIRQRPWGKWAAEIRDPHKGVRVWLGTYNTAEEAARAYDEAAKRIRGDKAKLNFPAATAPSPQPERPAKKRCLSPELSDGSNHPTGPPTPYQADLELKQQISDLESLLGLEPEEETSEQQQAVSGGGSSDGDEWAESVEMWMLDDVVLNHMANSELLY 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1102 248 FunFam Ethylene-responsive transcription factor 2 86 146 - -
Prci4g1102 248 MobiDBLite consensus disorder prediction 57 73 - -
Prci4g1102 248 Pfam AP2 domain 88 137 IPR001471 GO:0003700|GO:0006355
Prci4g1102 248 MobiDBLite consensus disorder prediction 198 224 - -
Prci4g1102 248 PRINTS Ethylene responsive element binding protein signature 89 100 IPR001471 GO:0003700|GO:0006355
Prci4g1102 248 PRINTS Ethylene responsive element binding protein signature 111 127 IPR001471 GO:0003700|GO:0006355
Prci4g1102 248 CDD AP2 89 147 IPR001471 GO:0003700|GO:0006355
Prci4g1102 248 MobiDBLite consensus disorder prediction 43 87 - -
Prci4g1102 248 SMART rav1_2 88 151 IPR001471 GO:0003700|GO:0006355
Prci4g1102 248 PANTHER DNA-BINDING DOMAIN 65 201 IPR044808 GO:0003700|GO:0009873
Prci4g1102 248 Gene3D AP2/ERF domain 88 147 IPR036955 GO:0003700|GO:0006355
Prci4g1102 248 MobiDBLite consensus disorder prediction 203 217 - -
Prci4g1102 248 MobiDBLite consensus disorder prediction 141 183 - -
Prci4g1102 248 ProSiteProfiles AP2/ERF domain profile. 88 145 IPR001471 GO:0003700|GO:0006355
Prci4g1102 248 SUPERFAMILY DNA-binding domain 88 146 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1102 Prci-Chr4 8422204 8424226 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1102 1 240 AP2-EREBP Transcription Factor Family AT3G16770 44.891 5.95e-57 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci4g1102 AP2 2.9e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1102 K09286 - tcc:18603555 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g1102 4 8422204 8424226 Prci4g1102 4 8422204 8424226 ECH