Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1101 ATGTGTGGTGGAGCTATCATTTCCGATTTCATTGCCGTCAAGCGAGGCCGGAAACTCACCGCCGGTGACTTCTGGTCCGAGCTCGACCCTTTCTCCGACCTCCTTGGCTTCGATATTAACGCCGGTTCTGCCAAAAACCAAACGCCTCGGAAACTCCCTCAAGTCCCAATCAGTAAAGGCGAGAAGAAGGAGAAGAAAAGCGTTAGCGCAGAGAAAGCAGGCGGGAAGAGCACTGGACAGAGAGCACGCAAGAACGTGTACAGAGGAATAAGGCAGAGGCCGTGGGGCAAGTGGGCCGCAGAGATAAGGGACCCACACAAGGGCGTCCGGGTGTGGCTCGGCACCTACAACACCGCCGAAGAAGCCGCCAGAGCCTACGACGAAGCGGCCAAGCGCATCCGCGGCGACAAAGCCAAGCTCAACTTCCCGGCCGCTACCGCCCCGAGTCCTCAGCCGGAGCGACCCGCCAAGAAGCGGTGCCTGAGCCCAGAGCTGAGTGACGGGAGCAACCATCCAACCGGGCCACCGACGCCGTACCAGGCGGATCTGGAGCTGAAGCAGCAGATATCAGACCTGGAGTCGCTGCTGGGACTGGAGCCCGAGGAAGAGACGAGCGAGCAGCAGCAGGCGGTGAGCGGAGGAGGGAGCAGCGACGGCGACGAGTGGGCGGAGTCGGTGGAGATGTGGATGCTGGACGACGTCGTGTTGAATCACATGGCAAATAGTGAGCTCTTGTACTGA 741 0.6046 MCGGAIISDFIAVKRGRKLTAGDFWSELDPFSDLLGFDINAGSAKNQTPRKLPQVPISKGEKKEKKSVSAEKAGGKSTGQRARKNVYRGIRQRPWGKWAAEIRDPHKGVRVWLGTYNTAEEAARAYDEAAKRIRGDKAKLNFPAATAPSPQPERPAKKRCLSPELSDGSNHPTGPPTPYQADLELKQQISDLESLLGLEPEEETSEQQQAVSGGGSSDGDEWAESVEMWMLDDVVLNHMANSELLY 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1101 246 FunFam Ethylene-responsive transcription factor 2 84 144 - -
Prci4g1101 246 ProSiteProfiles AP2/ERF domain profile. 86 143 IPR001471 GO:0003700|GO:0006355
Prci4g1101 246 MobiDBLite consensus disorder prediction 56 71 - -
Prci4g1101 246 MobiDBLite consensus disorder prediction 201 215 - -
Prci4g1101 246 MobiDBLite consensus disorder prediction 139 181 - -
Prci4g1101 246 Gene3D AP2/ERF domain 86 145 IPR036955 GO:0003700|GO:0006355
Prci4g1101 246 SMART rav1_2 86 149 IPR001471 GO:0003700|GO:0006355
Prci4g1101 246 PRINTS Ethylene responsive element binding protein signature 87 98 IPR001471 GO:0003700|GO:0006355
Prci4g1101 246 PRINTS Ethylene responsive element binding protein signature 109 125 IPR001471 GO:0003700|GO:0006355
Prci4g1101 246 MobiDBLite consensus disorder prediction 43 88 - -
Prci4g1101 246 Pfam AP2 domain 86 135 IPR001471 GO:0003700|GO:0006355
Prci4g1101 246 MobiDBLite consensus disorder prediction 196 223 - -
Prci4g1101 246 PANTHER DNA-BINDING DOMAIN 63 199 IPR044808 GO:0003700|GO:0009873
Prci4g1101 246 SUPERFAMILY DNA-binding domain 86 144 IPR016177 GO:0003677
Prci4g1101 246 CDD AP2 87 145 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1101 Prci-Chr4 8422204 8424227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1101 1 238 AP2-EREBP Transcription Factor Family AT3G16770 44.853 2.75e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci4g1101 AP2 2.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1101 K09286 - tcc:18603555 236.884