Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1099 ATGGTGCAAGATGATGAAGAAGTAGAGGATGACACTATCTTGCATTATGATGAATGTGCTAAAGACAGGGATGTTCCATCTATTGCTGCCTTACCAATTATACGGCCAGCCTTAGGTGGGCAGCAGTCTATCTCAGACAGAGCGATGGTTGCTATGCAAGGATATCTCAATCACTTTTTTGGAAATATTAGCATCGTTAACTCTCCAGAGGACAAAAGCTCAAAAACATTAAGGGTTTGCAAGTTTTTGGAGGCCTCAAAGTTATCTTTCGTACCTGAATATGGCTCCAAGTTGAAAGAAGAATATGTGATGGTTAAGCATCTGCCAAACATTTCAAAGGAGGATGATTCTAGACAATGTTGTATTGTTCAATGTTTCAGTTGTTGCAATGACAACTGGCAAAAGGTTTGGGCTGTACTAAAACCTGGATTCTTGGCATTTCTGGCAGATCCTTTTGATACCCAACCTCTGGACATCATTGCTTTTGATGTGCTCCGTGCTTCAGATGGGAATCGAGAAGGTTGTGTATCACTAGCAACAGAAATGATTGAACCAAACCCTTTACGCCATTCATTCAAGGTGACTTCTGGAAATCGGAGCATTAGGGTAAGAGCAAAGAGTAGTGATAAAGTTAAAGATTGGGTTACTGCTATAAATGATGCTGGAGTAAAACCTCCTGAAGGCTGGTGTCATCCTCATCGCTATGGTTCTTTTGCTCCTCCAAGAGGCTTGATTGAAGATGATAGCCAGGCTCAGTGGTTCATAGATGGTCAAGCAGCATTTGAAGCCATTTCTTCTTCAATTGAGGATGCAAAATCGGAGATATTTATTTGTGGGTGGTGGCTTTGCCCAGAGCTGTATCTGCGGCGTCCTTTTCACTCTCATGCTTTATCAAGGCTTGATAATTTGCTGGAAGCAAAGGCTAAGCAAGGGGTTCAGATTTTTATTCTTCTCTACAAAGAGGTGGCTCTTGCCTTGAAAATCAACAGCATATACAGCAAGAAAAAGCTTCTCAGCATTCATGAGAATGTGAGGGTATTACGTTATCCTGATCACTTTTCTAGTGGCATTTACTTGTGGTCCCACCATGAAAAACTGGTTATTGTTGATCACCAGATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGACACACCTGCGCACAGAGTGGGAGATTTCCCTCCTTTGATGTGGCCTGGAAAGGACTATTATAACCCTAGGGAATCTGAACCAAATTCCTGGGAAGATACAATGAAAGATGAATTAGATCGTGGAAAATATCCTCGTATGCCATGGCATGATGTTCACTGTGCCCTTTGGGGACCACCTTGTCGTGACATTGCTAGGCACTTTGTTCAGCGCTGGAATTATGCGAAGAGGAACAAGGCTCCATATGAGCAAGCAATACCATTACTTATGCCCCAGCATCACATGGTTATTCCACACTACTTGGGTAAAGACAAAGAATTGGAGATTGAAAATGAGAGGCCTATCAATCATAGAAGAATCAGAAGGGATGATTCCTTTTCCTTATCACCATCCCAAAATATTCCTCTGCTTTTGCCTCAGGAATCTGGTGGGCCGCATACTCCTAAAGGATACCAGGAATCAAATGGGTTAAGAACCTTTTCAAATCTCAATCAACAAACCAAGATGAGTGCTGGTCTTCCTCCCCTATTCCAGAAGGCCAAAATTCAACCAGTTAGCTCAGATAAACCAATGAAAGGCTTTGTAGATGAGCTTGATTATATTAATGAAAGTGGAAAAATGTCTCAAGAGAGAATTGCTTGTGTCAGCACAAAAGGCACAGATTCAGAATGGTGGGAGGCACAAGAACGGGGTGATCAGGGAGGCTTTGCAGATGTATCTGGACAAGTTGGTCCCCGTGCTTCATGCCGCTGTCAGGTTATTAGGAGTGTTAGTCAATGGTCTGCTGGGACAAGCCAAACTGAACAGAGCATCCACAATGCTTATTGCTCTCTAATTGAGAAAGCTGAATACTTCATCTACATCGAGAATCAATTTTTTATCTCAGGTCTTTCAGCAGATGAGATGATACAAAATCGTGTGTTAGAAGCTTTATATCAACGGATTATGCGAGCTTACAATGATCAAAAAATTTTTAGAGTTATAATTGTCATCCCACTCCTTCCTGGCTTCCAGGTTCTAATTATTTTTACTTTTTTTCTATACTGTTTCTACTTTGACAATAAATATTTCCTGCACAGTTGTTGGACCTTCATAATCATGCAGGGGGGCCTTGATGATAGTGGTGCGGCATCTGTCAGAGCCATAATGCATTGGCAGTATCGAACCATTTGCAGAGGACAAAAATCTATATTGCATAATCTGTGTGATCTCCTGGGTCCAAAAGCCCATGATTACATATCTTTCTTTGGCCTCAGGGCTTATGGAAGGCTATATGATGGGGGTCCTTTGGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATCGTCGATGACTGTACAACTTTGATAGGATCTGCTAATATTAACGATAGAAGTTTACTTGGCTCCAGAGACTCAGAGGAATTTCAGATTGGCGTTGTAATAGAAGACAGAGAGTTAACTGGATCATATATGGGTGGGAAACCATGGAAAGCAGGAAAGTTCTCGATGACTCTTCGAATGTCATTATGGTCTGAACACTTGGGTCTCCAAGCAGAAGAGATTGATCAAATAGTTGACCCAATTGTGGAGTCTACTTACAAGGACATTTGGATGGCAAGGGCAAAGAGAAATACTGCAATTTATCAAGATGTCTTTTCTTGCGTACCAAATGATCTGATACACACCAGAGTTGCTTTCAGACAAAGCACAGCTCGCTGGAAAGAAAAAATTGGCCACACAACTATTGATATAGGAATTGCCCCAAACGTGTTGGAATCTTTTCATAATGGAACTATCAAGAATACCGATCCCTTGGAGAGATTAGCTTCAGTGAAGGGTCATCTTGTTTCTTTTTCCTTGCAGTTCATGTGTCAAGAAAATTTAAAACCTGCCTTCAATGAAAGCGAGTACTACGCTTCTCAAGTTTTCCATTGA 3078 0.4146 MVQDDEEVEDDTILHYDECAKDRDVPSIAALPIIRPALGGQQSISDRAMVAMQGYLNHFFGNISIVNSPEDKSSKTLRVCKFLEASKLSFVPEYGSKLKEEYVMVKHLPNISKEDDSRQCCIVQCFSCCNDNWQKVWAVLKPGFLAFLADPFDTQPLDIIAFDVLRASDGNREGCVSLATEMIEPNPLRHSFKVTSGNRSIRVRAKSSDKVKDWVTAINDAGVKPPEGWCHPHRYGSFAPPRGLIEDDSQAQWFIDGQAAFEAISSSIEDAKSEIFICGWWLCPELYLRRPFHSHALSRLDNLLEAKAKQGVQIFILLYKEVALALKINSIYSKKKLLSIHENVRVLRYPDHFSSGIYLWSHHEKLVIVDHQICFIGGLDLCFGRYDTPAHRVGDFPPLMWPGKDYYNPRESEPNSWEDTMKDELDRGKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPYEQAIPLLMPQHHMVIPHYLGKDKELEIENERPINHRRIRRDDSFSLSPSQNIPLLLPQESGGPHTPKGYQESNGLRTFSNLNQQTKMSAGLPPLFQKAKIQPVSSDKPMKGFVDELDYINESGKMSQERIACVSTKGTDSEWWEAQERGDQGGFADVSGQVGPRASCRCQVIRSVSQWSAGTSQTEQSIHNAYCSLIEKAEYFIYIENQFFISGLSADEMIQNRVLEALYQRIMRAYNDQKIFRVIIVIPLLPGFQVLIIFTFFLYCFYFDNKYFLHSCWTFIIMQGGLDDSGAASVRAIMHWQYRTICRGQKSILHNLCDLLGPKAHDYISFFGLRAYGRLYDGGPLATSQVYVHSKIMIVDDCTTLIGSANINDRSLLGSRDSEEFQIGVVIEDRELTGSYMGGKPWKAGKFSMTLRMSLWSEHLGLQAEEIDQIVDPIVESTYKDIWMARAKRNTAIYQDVFSCVPNDLIHTRVAFRQSTARWKEKIGHTTIDIGIAPNVLESFHNGTIKNTDPLERLASVKGHLVSFSLQFMCQENLKPAFNESEYYASQVFH 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1099 1025 SMART pld_4 819 846 IPR001736 GO:0003824
Prci4g1099 1025 SMART pld_4 358 385 IPR001736 GO:0003824
Prci4g1099 1025 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 819 846 IPR001736 GO:0003824
Prci4g1099 1025 SUPERFAMILY Phospholipase D/nuclease 208 478 - -
Prci4g1099 1025 Gene3D - 113 222 IPR011993 -
Prci4g1099 1025 CDD PH_PLD 77 221 - -
Prci4g1099 1025 CDD PLDc_vPLD1_2_yPLD_like_2 649 866 - -
Prci4g1099 1025 PANTHER PHOSPHOLIPASE D 78 722 IPR015679 -
Prci4g1099 1025 Gene3D Endonuclease Chain A 588 881 - -
Prci4g1099 1025 ProSiteProfiles PH domain profile. 132 223 IPR001849 -
Prci4g1099 1025 SMART PH_update 97 225 IPR001849 -
Prci4g1099 1025 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 358 385 IPR001736 GO:0003824
Prci4g1099 1025 CDD PLDc_vPLD1_2_yPLD_like_1 251 395 - -
Prci4g1099 1025 Pfam PH domain 119 221 IPR001849 -
Prci4g1099 1025 SUPERFAMILY Phospholipase D/nuclease 630 852 - -
Prci4g1099 1025 Pfam Phospholipase D Active site motif 358 385 IPR001736 GO:0003824
Prci4g1099 1025 SUPERFAMILY PH domain-like 129 221 - -
Prci4g1099 1025 Gene3D Endonuclease Chain A 243 480 - -
Prci4g1099 1025 Pfam PLD-like domain 821 869 IPR025202 -
Prci4g1099 1025 PIRSF PLD_euk 5 499 IPR016555 GO:0004630|GO:0006654|GO:0048017
Prci4g1099 1025 PIRSF PLD_euk 527 728 IPR016555 GO:0004630|GO:0006654|GO:0048017
Prci4g1099 1025 PIRSF PLD_euk 752 1025 IPR016555 GO:0004630|GO:0006654|GO:0048017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1099 Prci-Chr4 8386714 8398426 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1099 1 902 Phospholipase D Gene Family (Wang group) AT3G16785 66.191 0.0 1157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1099 K01115 - gmx:100780514 1630.92