Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1098 ATGGCGTCGGAGGAATCGGTGACCGGGGGCGGCTCCCGGTACGTTCAACTCCCACCAGATCCGCCGCCAACGATAATGTCGCCCGTCGCATCGCACCGGCAAGGCGGCCCTGAGCCCAATCGGATTTTCGATGAGATGCCCAAAGCTACCATCGTCTCCGTCTCTCGTCCCGACGCTGGCGACATCAGTCCCATGCTTCTTTCTTACACCATCGAGTTTCAATACAAACAATTCAAGTGGGAGTTGGTGAAGAAAGCTTCTCAAGTGATATATTTACATTTTGCCTTGAAGAAACGTGCATTTATTGAGGAAATTAATGAAAAGCAAGAGCAGGTTAAAGAATGGCTTCAAAATCTAGGAATTGGAGAAAACACCACCATGGTGCAAGATGATGAAGAAGTAGAGGATGACACTATCTTGCATTATGATGAATGTGCTAAAGACAGGGATGTTCCATCTATTGCTGCCTTACCAATTATACGGCCAGCCTTAGGTGGGCAGCAGTCTATCTCAGACAGAGCGATGGTTGCTATGCAAGGATATCTCAATCACTTTTTTGGAAATATTAGCATCGTTAACTCTCCAGAGGACAAAAGCTCAAAAACATTAAGGGTTTGCAAGTTTTTGGAGGCCTCAAAGTTATCTTTCGTACCTGAATATGGCTCCAAGTTGAAAGAAGAATATGTGATGGTTAAGCATCTGCCAAACATTTCAAAGGAGGATGATTCTAGACAATGTTGTATTGTTCAATGTTTCAGTTGTTGCAATGACAACTGGCAAAAGGTTTGGGCTGTACTAAAACCTGGATTCTTGGCATTTCTGGCAGATCCTTTTGATACCCAACCTCTGGACATCATTGCTTTTGATGTGCTCCGTGCTTCAGATGGGAATCGAGAAGGTTGTGTATCACTAGCAACAGAAATGATTGAACCAAACCCTTTACGCCATTCATTCAAGGTGACTTCTGGAAATCGGAGCATTAGGGTAAGAGCAAAGAGTAGTGATAAAGTTAAAGATTGGGTTACTGCTATAAATGATGCTGGAGTAAAACCTCCTGAAGGCTGGTGTCATCCTCATCGCTATGGTTCTTTTGCTCCTCCAAGAGGCTTGATTGAAGATGATAGCCAGGCTCAGTGGTTCATAGATGGTCAAGCAGCATTTGAAGCCATTTCTTCTTCAATTGAGGATGCAAAATCGGAGATATTTATTTGTGGGTGGTGGCTTTGCCCAGAGCTGTATCTGCGGCGTCCTTTTCACTCTCATGCTTTATCAAGGCTTGATAATTTGCTGGAAGCAAAGGCTAAGCAAGGGGTTCAGATTTTTATTCTTCTCTACAAAGAGGTGGCTCTTGCCTTGAAAATCAACAGCATATACAGCAAGAAAAAGCTTCTCAGCATTCATGAGAATGTGAGGGTATTACGTTATCCTGATCACTTTTCTAGTGGCATTTACTTGTGGTCCCACCATGAAAAACTGGTTATTGTTGATCACCAGATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGACACACCTGCGCACAGAGTGGGAGATTTCCCTCCTTTGATGTGGCCTGGAAAGGACTATTATAACCCTAGGGAATCTGAACCAAATTCCTGGGAAGATACAATGAAAGATGAATTAGATCGTGGAAAATATCCTCGTATGCCATGGCATGATGTTCACTGTGCCCTTTGGGGACCACCTTGTCGTGACATTGCTAGGCACTTTGTTCAGCGCTGGAATTATGCGAAGAGGAACAAGGCTCCATATGAGCAAGCAATACCATTACTTATGCCCCAGCATCACATGGTTATTCCACACTACTTGGGTAAAGACAAAGAATTGGAGATTGAAAATGAGAGGCCTATCAATCATAGAAGAATCAGAAGGGATGATTCCTTTTCCTTATCACCATCCCAAAATATTCCTCTGCTTTTGCCTCAGGAATCTGGTGGGCCGCATACTCCTAAAGGATACCAGGAATCAAATGGGTTAAGAACCTTTTCAAATCTCAATCAACAAACCAAGATGAGTGCTGGTCTTCCTCCCCTATTCCAGAAGGCCAAAATTCAACCAGTTAGCTCAGATAAACCAATGAAAGGCTTTGTAGATGAGCTTGATTATATTAATGAAAGTGGAAAAATGTCTCAAGAGAGAATTGCTTGTGTCAGCACAAAAGGCACAGATTCAGAATGGTGGGAGGCACAAGAACGGGGTGATCAGGGAGGCTTTGCAGATGTATCTGGACAAGTTGGTCCCCGTGCTTCATGCCGCTGTCAGGTTATTAGGAGTGTTAGTCAATGGTCTGCTGGGACAAGCCAAACTGAACAGAGCATCCACAATGCTTATTGCTCTCTAATTGAGAAAGCTGAATACTTCATCTACATCGAGAATCAATTTTTTATCTCAGGTCTTTCAGCAGATGAGATGATACAAAATCGTGTGTTAGAAGCTTTATATCAACGGATTATGCGAGCTTACAATGATCAAAAAATTTTTAGAGTTATAATTGTCATCCCACTCCTTCCTGGCTTCCAGGTTCTAATTATTTTTACTTTTTTTCTATACTGTTTCTACTTTGACAATAAATATTTCCTGCACAGTTGTTGGACCTTCATAATCATGCAGGGGGGCCTTGATGATAGTGGTGCGGCATCTGTCAGAGCCATAATGCATTGGCAGTATCGAACCATTTGCAGAGGACAAAAATCTATATTGCATAATCTGTGTGATCTCCTGGGTCCAAAAGCCCATGATTACATATCTTTCTTTGGCCTCAGGGCTTATGGAAGGCTATATGATGGGGGTCCTTTGGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATCGTCGATGACTGTACAACTTTGATAGGATCTGCTAATATTAACGATAGAAGTTTACTTGGCTCCAGAGACTCAGAGGAATTTCAGATTGGCGTTGTAATAGAAGACAGAGAGTTAACTGGATCATATATGGGTGGGAAACCATGGAAAGCAGGAAAGTTCTCGATGACTCTTCGAATGTCATTATGGTCTGAACACTTGGGTCTCCAAGCAGAAGAGATTGATCAAATAGTTGACCCAATTGTGGAGTCTACTTACAAGGACATTTGGATGGCAAGGGCAAAGAGAAATACTGCAATTTATCAAGATGTCTTTTCTTGCGTACCAAATGATCTGATACACACCAGAGTTGCTTTCAGACAAAGCACAGCTCGCTGGAAAGAAAAAATTGGCCACACAACTATTGATATAGGAATTGCCCCAAACGTGTTGGAATCTTTTCATAATGGAACTATCAAGAATACCGATCCCTTGGAGAGATTAGCTTCAGTGAAGGGTCATCTTGTTTCTTTTTCCTTGCAGTTCATGTGTCAAGAAAATTTAAAACCTGCCTTCAATGAAAGCGAGTACTACGCTTCTCAAGTTTTCCATTGA 3456 0.4236 MASEESVTGGGSRYVQLPPDPPPTIMSPVASHRQGGPEPNRIFDEMPKATIVSVSRPDAGDISPMLLSYTIEFQYKQFKWELVKKASQVIYLHFALKKRAFIEEINEKQEQVKEWLQNLGIGENTTMVQDDEEVEDDTILHYDECAKDRDVPSIAALPIIRPALGGQQSISDRAMVAMQGYLNHFFGNISIVNSPEDKSSKTLRVCKFLEASKLSFVPEYGSKLKEEYVMVKHLPNISKEDDSRQCCIVQCFSCCNDNWQKVWAVLKPGFLAFLADPFDTQPLDIIAFDVLRASDGNREGCVSLATEMIEPNPLRHSFKVTSGNRSIRVRAKSSDKVKDWVTAINDAGVKPPEGWCHPHRYGSFAPPRGLIEDDSQAQWFIDGQAAFEAISSSIEDAKSEIFICGWWLCPELYLRRPFHSHALSRLDNLLEAKAKQGVQIFILLYKEVALALKINSIYSKKKLLSIHENVRVLRYPDHFSSGIYLWSHHEKLVIVDHQICFIGGLDLCFGRYDTPAHRVGDFPPLMWPGKDYYNPRESEPNSWEDTMKDELDRGKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPYEQAIPLLMPQHHMVIPHYLGKDKELEIENERPINHRRIRRDDSFSLSPSQNIPLLLPQESGGPHTPKGYQESNGLRTFSNLNQQTKMSAGLPPLFQKAKIQPVSSDKPMKGFVDELDYINESGKMSQERIACVSTKGTDSEWWEAQERGDQGGFADVSGQVGPRASCRCQVIRSVSQWSAGTSQTEQSIHNAYCSLIEKAEYFIYIENQFFISGLSADEMIQNRVLEALYQRIMRAYNDQKIFRVIIVIPLLPGFQVLIIFTFFLYCFYFDNKYFLHSCWTFIIMQGGLDDSGAASVRAIMHWQYRTICRGQKSILHNLCDLLGPKAHDYISFFGLRAYGRLYDGGPLATSQVYVHSKIMIVDDCTTLIGSANINDRSLLGSRDSEEFQIGVVIEDRELTGSYMGGKPWKAGKFSMTLRMSLWSEHLGLQAEEIDQIVDPIVESTYKDIWMARAKRNTAIYQDVFSCVPNDLIHTRVAFRQSTARWKEKIGHTTIDIGIAPNVLESFHNGTIKNTDPLERLASVKGHLVSFSLQFMCQENLKPAFNESEYYASQVFH 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1098 1151 PIRSF PLD_euk 50 626 IPR016555 GO:0004630|GO:0006654|GO:0048017
Prci4g1098 1151 PIRSF PLD_euk 878 1151 IPR016555 GO:0004630|GO:0006654|GO:0048017
Prci4g1098 1151 PIRSF PLD_euk 654 854 IPR016555 GO:0004630|GO:0006654|GO:0048017
Prci4g1098 1151 ProSiteProfiles PH domain profile. 258 349 IPR001849 -
Prci4g1098 1151 SUPERFAMILY Phospholipase D/nuclease 756 978 - -
Prci4g1098 1151 CDD PH_PLD 203 347 - -
Prci4g1098 1151 Gene3D Endonuclease Chain A 369 606 - -
Prci4g1098 1151 SMART PH_update 223 351 IPR001849 -
Prci4g1098 1151 Gene3D Endonuclease Chain A 714 1007 - -
Prci4g1098 1151 SUPERFAMILY Phospholipase D/nuclease 334 604 - -
Prci4g1098 1151 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 945 972 IPR001736 GO:0003824
Prci4g1098 1151 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 484 511 IPR001736 GO:0003824
Prci4g1098 1151 SMART pld_4 484 511 IPR001736 GO:0003824
Prci4g1098 1151 SMART pld_4 945 972 IPR001736 GO:0003824
Prci4g1098 1151 CDD PLDc_vPLD1_2_yPLD_like_2 775 992 - -
Prci4g1098 1151 MobiDBLite consensus disorder prediction 1 36 - -
Prci4g1098 1151 Pfam PLD-like domain 947 995 IPR025202 -
Prci4g1098 1151 Coils Coil 98 118 - -
Prci4g1098 1151 Pfam PH domain 245 347 IPR001849 -
Prci4g1098 1151 CDD PLDc_vPLD1_2_yPLD_like_1 377 521 - -
Prci4g1098 1151 Gene3D - 240 348 IPR011993 -
Prci4g1098 1151 Pfam Phospholipase D Active site motif 484 511 IPR001736 GO:0003824
Prci4g1098 1151 SUPERFAMILY PH domain-like 255 347 - -
Prci4g1098 1151 PANTHER PHOSPHOLIPASE D 203 848 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1098 Prci-Chr4 8386714 8399581 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1098 1 1028 Phospholipase D Gene Family (Wang group) AT3G16785 66.635 0.0 1324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1098 K01115 - gmx:100780514 1808.88