Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1097 ATGGCGTCGGAGGAATCGGTGACCGGGGGCGGCTCCCGGTACGTTCAACTCCCACCAGATCCGCCGCCAACGATAATGTCGCCCGTCGCATCGCACCGGCAAGGCGGCCCTGAGCCCAATCGGATTTTCGATGAGATGCCCAAAGCTACCATCGTCTCCGTCTCTCGTCCCGACGCTGGCGACATCAGTCCCATGCTTCTTTCTTACACCATCGAGTTTCAATACAAACAATTCAAGTGGGAGTTGGTGAAGAAAGCTTCTCAAGTGATATATTTACATTTTGCCTTGAAGAAACGTGCATTTATTGAGGAAATTAATGAAAAGCAAGAGCAGGTTAAAGAATGGCTTCAAAATCTAGGAATTGGAGAAAACACCACCATGGTGCAAGATGATGAAGAAGTAGAGGATGACACTATCTTGCATTATGATGAATGTGCTAAAGACAGGGATGTTCCATCTATTGCTGCCTTACCAATTATACGGCCAGCCTTAGGTGGGCAGCAGTCTATCTCAGACAGAGCGATGGTTGCTATGCAAGGATATCTCAATCACTTTTTTGGAAATATTAGCATCGTTAACTCTCCAGAGGACAAAAGCTCAAAAACATTAAGGGTTTGCAAGTTTTTGGAGGCCTCAAAGTTATCTTTCGTACCTGAATATGGCTCCAAGTTGAAAGAAGAATATGTGATGGTTAAGCATCTGCCAAACATTTCAAAGGAGGATGATTCTAGACAATGTTGTATTGTTCAATGTTTCAGTTGTTGCAATGACAACTGGCAAAAGGTTTGGGCTGTACTAAAACCTGGATTCTTGGCATTTCTGGCAGATCCTTTTGATACCCAACCTCTGGACATCATTGCTTTTGATGTGCTCCGTGCTTCAGATGGGAATCGAGAAGGTTGTGTATCACTAGCAACAGAAATGATTGAACCAAACCCTTTACGCCATTCATTCAAGGTGACTTCTGGAAATCGGAGCATTAGGGTAAGAGCAAAGAGTAGTGATAAAGTTAAAGATTGGGTTACTGCTATAAATGATGCTGGAGTAAAACCTCCTGAAGGCTGGTGTCATCCTCATCGCTATGGTTCTTTTGCTCCTCCAAGAGGCTTGATTGAAGATGATAGCCAGGCTCAGTGGTTCATAGATGGTCAAGCAGCATTTGAAGCCATTTCTTCTTCAATTGAGGATGCAAAATCGGAGATATTTATTTGTGGGTGGTGGCTTTGCCCAGAGCTGTATCTGCGGCGTCCTTTTCACTCTCATGCTTTATCAAGGCTTGATAATTTGCTGGAAGCAAAGGCTAAGCAAGGGGTTCAGATTTTTATTCTTCTCTACAAAGAGGTGGCTCTTGCCTTGAAAATCAACAGCATATACAGCAAGAAAAAGCTTCTCAGCATTCATGAGAATGTGAGGGTATTACGTTATCCTGATCACTTTTCTAGTGGCATTTACTTGTGGTCCCACCATGAAAAACTGGTTATTGTTGATCACCAGATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGACACACCTGCGCACAGAGTGGGAGATTTCCCTCCTTTGATGTGGCCTGGAAAGGACTATTATAACCCTAGGGAATCTGAACCAAATTCCTGGGAAGATACAATGAAAGATGAATTAGATCGTGGAAAATATCCTCGTATGCCATGGCATGATGTTCACTGTGCCCTTTGGGGACCACCTTGTCGTGACATTGCTAGGCACTTTGTTCAGCGCTGGAATTATGCGAAGAGGAACAAGGCTCCATATGAGCAAGCAATACCATTACTTATGCCCCAGCATCACATGGTTATTCCACACTACTTGGGTAAAGACAAAGAATTGGAGATTGAAAATGAGAGGCCTATCAATCATAGAAGAATCAGAAGGGATGATTCCTTTTCCTTATCACCATCCCAAAATATTCCTCTGCTTTTGCCTCAGGAATCTGGTGGGCCGCATACTCCTAAAGGATACCAGGAATCAAATGGGTTAAGAACCTTTTCAAATCTCAATCAACAAACCAAGATGAGTGCTGGTCTTCCTCCCCTATTCCAGAAGGCCAAAATTCAACCAGTTAGCTCAGATAAACCAATGAAAGGCTTTGTAGATGAGCTTGATTATATTAATGAAAGTGGAAAAATGTCTCAAGAGAGAATTGCTTGTGTCAGCACAAAAGGCACAGATTCAGAATGGTGGGAGGCACAAGAACGGGGTGATCAGGGAGGCTTTGCAGATGTATCTGGACAAGTTGGTCCCCGTGCTTCATGCCGCTGTCAGGTTATTAGGAGTGTTAGTCAATGGTCTGCTGGGACAAGCCAAACTGAACAGAGCATCCACAATGCTTATTGCTCTCTAATTGAGAAAGCTGAATACTTCATCTACATCGAGAATCAATTTTTTATCTCAGGTCTTTCAGCAGATGAGATGATACAAAATCGTGTGTTAGAAGCTTTATATCAACGGATTATGCGAGCTTACAATGATCAAAAAATTTTTAGAGTTATAATTGTCATCCCACTCCTTCCTGGCTTCCAGGGGGGCCTTGATGATAGTGGTGCGGCATCTGTCAGAGCCATAATGCATTGGCAGTATCGAACCATTTGCAGAGGACAAAAATCTATATTGCATAATCTGTGTGATCTCCTGGGTCCAAAAGCCCATGATTACATATCTTTCTTTGGCCTCAGGGCTTATGGAAGGCTATATGATGGGGGTCCTTTGGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATCGTCGATGACTGTACAACTTTGATAGGATCTGCTAATATTAACGATAGAAGTTTACTTGGCTCCAGAGACTCAGAGATTGGCGTTGTAATAGAAGACAGAGAGTTAACTGGATCATATATGGGTGGGAAACCATGGAAAGCAGGAAAGTTCTCGATGACTCTTCGAATGTCATTATGGTCTGAACACTTGGGTCTCCAAGCAGAAGAGATTGATCAAATAGTTGACCCAATTGTGGAGTCTACTTACAAGGACATTTGGATGGCAAGGGCAAAGAGAAATACTGCAATTTATCAAGATGTCTTTTCTTGCGTACCAAATGATCTGATACACACCAGAGTTGCTTTCAGACAAAGCACAGCTCGCTGGAAAGAAAAAATTGGCCACACAACTATTGATATAGGAATTGCCCCAAACGTGTTGGAATCTTTTCATAATGGAACTATCAAGAATACCGATCCCTTGGAGAGATTAGCTTCAGTGAAGGGTCATCTTGTTTCTTTTTCCTTGCAGTTCATGTGTCAAGAAAATTTAAAACCTGCCTTCAATGAAAGCGAGTACTACGCTTCTCAAGTTTTCCATTGA 3357 0.4275 MASEESVTGGGSRYVQLPPDPPPTIMSPVASHRQGGPEPNRIFDEMPKATIVSVSRPDAGDISPMLLSYTIEFQYKQFKWELVKKASQVIYLHFALKKRAFIEEINEKQEQVKEWLQNLGIGENTTMVQDDEEVEDDTILHYDECAKDRDVPSIAALPIIRPALGGQQSISDRAMVAMQGYLNHFFGNISIVNSPEDKSSKTLRVCKFLEASKLSFVPEYGSKLKEEYVMVKHLPNISKEDDSRQCCIVQCFSCCNDNWQKVWAVLKPGFLAFLADPFDTQPLDIIAFDVLRASDGNREGCVSLATEMIEPNPLRHSFKVTSGNRSIRVRAKSSDKVKDWVTAINDAGVKPPEGWCHPHRYGSFAPPRGLIEDDSQAQWFIDGQAAFEAISSSIEDAKSEIFICGWWLCPELYLRRPFHSHALSRLDNLLEAKAKQGVQIFILLYKEVALALKINSIYSKKKLLSIHENVRVLRYPDHFSSGIYLWSHHEKLVIVDHQICFIGGLDLCFGRYDTPAHRVGDFPPLMWPGKDYYNPRESEPNSWEDTMKDELDRGKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPYEQAIPLLMPQHHMVIPHYLGKDKELEIENERPINHRRIRRDDSFSLSPSQNIPLLLPQESGGPHTPKGYQESNGLRTFSNLNQQTKMSAGLPPLFQKAKIQPVSSDKPMKGFVDELDYINESGKMSQERIACVSTKGTDSEWWEAQERGDQGGFADVSGQVGPRASCRCQVIRSVSQWSAGTSQTEQSIHNAYCSLIEKAEYFIYIENQFFISGLSADEMIQNRVLEALYQRIMRAYNDQKIFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQKSILHNLCDLLGPKAHDYISFFGLRAYGRLYDGGPLATSQVYVHSKIMIVDDCTTLIGSANINDRSLLGSRDSEIGVVIEDRELTGSYMGGKPWKAGKFSMTLRMSLWSEHLGLQAEEIDQIVDPIVESTYKDIWMARAKRNTAIYQDVFSCVPNDLIHTRVAFRQSTARWKEKIGHTTIDIGIAPNVLESFHNGTIKNTDPLERLASVKGHLVSFSLQFMCQENLKPAFNESEYYASQVFH 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1097 1118 CDD PLDc_vPLD1_2_yPLD_like_2 775 959 - -
Prci4g1097 1118 SMART pld_4 915 942 IPR001736 GO:0003824
Prci4g1097 1118 SMART pld_4 484 511 IPR001736 GO:0003824
Prci4g1097 1118 SUPERFAMILY PH domain-like 255 347 - -
Prci4g1097 1118 ProSiteProfiles PH domain profile. 258 349 IPR001849 -
Prci4g1097 1118 Gene3D Endonuclease Chain A 369 606 - -
Prci4g1097 1118 CDD PH_PLD 203 347 - -
Prci4g1097 1118 SMART PH_update 223 351 IPR001849 -
Prci4g1097 1118 SUPERFAMILY Phospholipase D/nuclease 756 964 - -
Prci4g1097 1118 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 484 511 IPR001736 GO:0003824
Prci4g1097 1118 PANTHER PHOSPHOLIPASE D 203 1108 IPR015679 -
Prci4g1097 1118 Gene3D - 239 348 IPR011993 -
Prci4g1097 1118 MobiDBLite consensus disorder prediction 1 36 - -
Prci4g1097 1118 Gene3D Endonuclease Chain A 714 974 - -
Prci4g1097 1118 FunFam Phospholipase 749 969 - -
Prci4g1097 1118 Coils Coil 98 118 - -
Prci4g1097 1118 CDD PLDc_vPLD1_2_yPLD_like_1 377 521 - -
Prci4g1097 1118 Pfam PLD-like domain 844 962 IPR025202 -
Prci4g1097 1118 Pfam Phospholipase D Active site motif 484 511 IPR001736 GO:0003824
Prci4g1097 1118 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 915 942 IPR001736 GO:0003824
Prci4g1097 1118 Pfam PH domain 245 347 IPR001849 -
Prci4g1097 1118 PIRSF PLD_euk 48 626 IPR016555 GO:0004630|GO:0006654|GO:0048017
Prci4g1097 1118 PIRSF PLD_euk 653 1118 IPR016555 GO:0004630|GO:0006654|GO:0048017
Prci4g1097 1118 SUPERFAMILY Phospholipase D/nuclease 334 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1097 Prci-Chr4 8386714 8399581 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1097 1 995 Phospholipase D Gene Family (Wang group) AT3G16785 68.818 0.0 1345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1097 K01115 - gmx:100780514 1830.07