Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1096 ATGGCGTCGGAGGAATCGGTGACCGGGGGCGGCTCCCGGTACGTTCAACTCCCACCAGATCCGCCGCCAACGATAATGTCGCCCGTCGCATCGCACCGGCAAGGCGGCCCTGAGCCCAATCGGATTTTCGATGAGATGCCCAAAGCTACCATCGTCTCCGTCTCTCGTCCCGACGCTGGCGACATCAGTCCCATGCTTCTTTCTTACACCATCGAGTTTCAATACAAACAATTCAAGTGGGAGTTGGTGAAGAAAGCTTCTCAAGTGATATATTTACATTTTGCCTTGAAGAAACGTGCATTTATTGAGGAAATTAATGAAAAGCAAGAGCAGGTTAAAGAATGGCTTCAAAATCTAGGAATTGGAGAAAACACCACCATGGTGCAAGATGATGAAGAAGTAGAGGATGACACTATCTTGCATTATGATGAATGTGCTAAAGACAGGGATGTTCCATCTATTGCTGCCTTACCAATTATACGGCCAGCCTTAGGTGGGCAGCAGTCTATCTCAGACAGAGCGATGGTTGCTATGCAAGGATATCTCAATCACTTTTTTGGAAATATTAGCATCGTTAACTCTCCAGAGGACAAAAGCTCAAAAACATTAAGGGTTTGCAAGTTTTTGGAGGCCTCAAAGTTATCTTTCGTACCTGAATATGGCTCCAAGTTGAAAGAAGAATATGTGATGGTTAAGCATCTGCCAAACATTTCAAAGGAGGATGATTCTAGACAATGTTGTATTGTTCAATGTTTCAGTTGTTGCAATGACAACTGGCAAAAGGTTTGGGCTGTACTAAAACCTGGATTCTTGGCATTTCTGGCAGATCCTTTTGATACCCAACCTCTGGACATCATTGCTTTTGATGTGCTCCGTGCTTCAGATGGGAATCGAGAAGGTTGTGTATCACTAGCAACAGAAATGATTGAACCAAACCCTTTACGCCATTCATTCAAGGTGACTTCTGGAAATCGGAGCATTAGGGTAAGAGCAAAGAGTAGTGATAAAGTTAAAGATTGGGTTACTGCTATAAATGATGCTGGAGTAAAACCTCCTGAAGGCTGGTGTCATCCTCATCGCTATGGTTCTTTTGCTCCTCCAAGAGGCTTGATTGAAGATGATAGCCAGGCTCAGTGGTTCATAGATGGTCAAGCAGCATTTGAAGCCATTTCTTCTTCAATTGAGGATGCAAAATCGGAGATATTTATTTGTGGGTGGTGGCTTTGCCCAGAGCTGTATCTGCGGCGTCCTTTTCACTCTCATGCTTTATCAAGGCTTGATAATTTGCTGGAAGCAAAGGCTAAGCAAGGGGTTCAGATTTTTATTCTTCTCTACAAAGAGGTGGCTCTTGCCTTGAAAATCAACAGCATATACAGCAAGAAAAAGCTTCTCAGCATTCATGAGAATGTGAGGGTATTACGTTATCCTGATCACTTTTCTAGTGGCATTTACTTGTGGTCCCACCATGAAAAACTGGTTATTGTTGATCACCAGATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGACACACCTGCGCACAGAGTGGGAGATTTCCCTCCTTTGATGTGGCCTGGAAAGGACTATTATAACCCTAGGGAATCTGAACCAAATTCCTGGGAAGATACAATGAAAGATGAATTAGATCGTGGAAAATATCCTCGTATGCCATGGCATGATGTTCACTGTGCCCTTTGGGGACCACCTTGTCGTGACATTGCTAGGCACTTTGTTCAGCGCTGGAATTATGCGAAGGAATCTGGTGGGCCGCATACTCCTAAAGGATACCAGGAATCAAATGGGTTAAGAACCTTTTCAAATCTCAATCAACAAACCAAGATGAGTGCTGGTCTTCCTCCCCTATTCCAGAAGGCCAAAATTCAACCAGTTAGCTCAGATAAACCAATGAAAGGCTTTGTAGATGAGCTTGATTATATTAATGAAAGTGGAAAAATGTCTCAAGAGAGAATTGCTTGTGTCAGCACAAAAGGCACAGATTCAGAATGGTGGGAGGCACAAGAACGGGGTGATCAGGGAGGCTTTGCAGATGTATCTGGACAAGTTGGTCCCCGTGCTTCATGCCGCTGTCAGGTTATTAGGAGTGTTAGTCAATGGTCTGCTGGGACAAGCCAAACTGAACAGAGCATCCACAATGCTTATTGCTCTCTAATTGAGAAAGCTGAATACTTCATCTACATCGAGAATCAATTTTTTATCTCAGGTCTTTCAGCAGATGAGATGATACAAAATCGTGTGTTAGAAGCTTTATATCAACGGATTATGCGAGCTTACAATGATCAAAAAATTTTTAGAGTTATAATTGTCATCCCACTCCTTCCTGGCTTCCAGGTTCTAATTATTTTTACTTTTTTTCTATACTGTTTCTACTTTGACAATAAATATTTCCTGCACAGTTGTTGGACCTTCATAATCATGCAGGGGGGCCTTGATGATAGTGGTGCGGCATCTGTCAGAGCCATAATGCATTGGCAGTATCGAACCATTTGCAGAGGACAAAAATCTATATTGCATAATCTGTGTGATCTCCTGGGTCCAAAAGCCCATGATTACATATCTTTCTTTGGCCTCAGGGCTTATGGAAGGCTATATGATGGGGGTCCTTTGGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATCGTCGATGACTGTACAACTTTGATAGGATCTGCTAATATTAACGATAGAAGTTTACTTGGCTCCAGAGACTCAGAGGAATTTCAGATTGGCGTTGTAATAGAAGACAGAGAGTTAACTGGATCATATATGGGTGGGAAACCATGGAAAGCAGGAAAGTTCTCGATGACTCTTCGAATGTCATTATGGTCTGAACACTTGGGTCTCCAAGCAGAAGAGATTGATCAAATAGTTGACCCAATTGTGGAGTCTACTTACAAGGACATTTGGATGGCAAGGGCAAAGAGAAATACTGCAATTTATCAAGATGTCTTTTCTTGCGTACCAAATGATCTGATACACACCAGAGTTGCTTTCAGACAAAGCACAGCTCGCTGGAAAGAAAAAATTGGCCACACAACTATTGATATAGGAATTGCCCCAAACGTGTTGGAATCTTTTCATAATGGAACTATCAAGAATACCGATCCCTTGGAGAGATTAGCTTCAGTGAAGGGTCATCTTGTTTCTTTTTCCTTGCAGTTCATGTGTCAAGAAAATTTAAAACCTGCCTTCAATGAAAGCGAGTACTACGCTTCTCAAGTTTTCCATTGA 3264 0.4246 MASEESVTGGGSRYVQLPPDPPPTIMSPVASHRQGGPEPNRIFDEMPKATIVSVSRPDAGDISPMLLSYTIEFQYKQFKWELVKKASQVIYLHFALKKRAFIEEINEKQEQVKEWLQNLGIGENTTMVQDDEEVEDDTILHYDECAKDRDVPSIAALPIIRPALGGQQSISDRAMVAMQGYLNHFFGNISIVNSPEDKSSKTLRVCKFLEASKLSFVPEYGSKLKEEYVMVKHLPNISKEDDSRQCCIVQCFSCCNDNWQKVWAVLKPGFLAFLADPFDTQPLDIIAFDVLRASDGNREGCVSLATEMIEPNPLRHSFKVTSGNRSIRVRAKSSDKVKDWVTAINDAGVKPPEGWCHPHRYGSFAPPRGLIEDDSQAQWFIDGQAAFEAISSSIEDAKSEIFICGWWLCPELYLRRPFHSHALSRLDNLLEAKAKQGVQIFILLYKEVALALKINSIYSKKKLLSIHENVRVLRYPDHFSSGIYLWSHHEKLVIVDHQICFIGGLDLCFGRYDTPAHRVGDFPPLMWPGKDYYNPRESEPNSWEDTMKDELDRGKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKESGGPHTPKGYQESNGLRTFSNLNQQTKMSAGLPPLFQKAKIQPVSSDKPMKGFVDELDYINESGKMSQERIACVSTKGTDSEWWEAQERGDQGGFADVSGQVGPRASCRCQVIRSVSQWSAGTSQTEQSIHNAYCSLIEKAEYFIYIENQFFISGLSADEMIQNRVLEALYQRIMRAYNDQKIFRVIIVIPLLPGFQVLIIFTFFLYCFYFDNKYFLHSCWTFIIMQGGLDDSGAASVRAIMHWQYRTICRGQKSILHNLCDLLGPKAHDYISFFGLRAYGRLYDGGPLATSQVYVHSKIMIVDDCTTLIGSANINDRSLLGSRDSEEFQIGVVIEDRELTGSYMGGKPWKAGKFSMTLRMSLWSEHLGLQAEEIDQIVDPIVESTYKDIWMARAKRNTAIYQDVFSCVPNDLIHTRVAFRQSTARWKEKIGHTTIDIGIAPNVLESFHNGTIKNTDPLERLASVKGHLVSFSLQFMCQENLKPAFNESEYYASQVFH 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1096 1087 ProSiteProfiles PH domain profile. 258 349 IPR001849 -
Prci4g1096 1087 Pfam PH domain 245 347 IPR001849 -
Prci4g1096 1087 CDD PH_PLD 203 347 - -
Prci4g1096 1087 Gene3D - 239 348 IPR011993 -
Prci4g1096 1087 SMART PH_update 223 351 IPR001849 -
Prci4g1096 1087 Gene3D Endonuclease Chain A 650 943 - -
Prci4g1096 1087 SUPERFAMILY Phospholipase D/nuclease 692 914 - -
Prci4g1096 1087 Gene3D Endonuclease Chain A 369 620 - -
Prci4g1096 1087 SUPERFAMILY PH domain-like 255 347 - -
Prci4g1096 1087 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 484 511 IPR001736 GO:0003824
Prci4g1096 1087 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 881 908 IPR001736 GO:0003824
Prci4g1096 1087 PANTHER PHOSPHOLIPASE D 203 784 IPR015679 -
Prci4g1096 1087 MobiDBLite consensus disorder prediction 1 36 - -
Prci4g1096 1087 Pfam PLD-like domain 883 931 IPR025202 -
Prci4g1096 1087 Pfam Phospholipase D Active site motif 484 511 IPR001736 GO:0003824
Prci4g1096 1087 Coils Coil 98 118 - -
Prci4g1096 1087 SMART pld_4 881 908 IPR001736 GO:0003824
Prci4g1096 1087 SMART pld_4 484 511 IPR001736 GO:0003824
Prci4g1096 1087 SUPERFAMILY Phospholipase D/nuclease 334 589 - -
Prci4g1096 1087 CDD PLDc_vPLD1_2_yPLD_like_1 377 521 - -
Prci4g1096 1087 PIRSF PLD_euk 814 1087 IPR016555 GO:0004630|GO:0006654|GO:0048017
Prci4g1096 1087 PIRSF PLD_euk 52 790 IPR016555 GO:0004630|GO:0006654|GO:0048017
Prci4g1096 1087 CDD PLDc_vPLD1_2_yPLD_like_2 711 928 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1096 Prci-Chr4 8386714 8399581 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1096 41 1087 Phospholipase D Gene Family (Wang group) AT3G05630 58.233 0.0 1206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1096 K01115 - jre:108994775 1614.74