Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1095 ATGGCGTCGGAGGAATCGGTGACCGGGGGCGGCTCCCGGTACGTTCAACTCCCACCAGATCCGCCGCCAACGATAATGTCGCCCGTCGCATCGCACCGGCAAGGCGGCCCTGAGCCCAATCGGATTTTCGATGAGATGCCCAAAGCTACCATCGTCTCCGTCTCTCGTCCCGACGCTGGCGACATCAGTCCCATGCTTCTTTCTTACACCATCGAGTTTCAATACAAACAATTCAAGTGGGAGTTGGTGAAGAAAGCTTCTCAAGTGATATATTTACATTTTGCCTTGAAGAAACGTGCATTTATTGAGGAAATTAATGAAAAGCAAGAGCAGGTTAAAGAATGGCTTCAAAATCTAGGAATTGGAGAAAACACCACCATGGTGCAAGATGATGAAGAAGTAGAGGATGACACTATCTTGCATTATGATGAATGTGCTAAAGACAGGGATGTTCCATCTATTGCTGCCTTACCAATTATACGGCCAGCCTTAGGTGGGCAGCAGTCTATCTCAGACAGAGCGATGGTTGCTATGCAAGGATATCTCAATCACTTTTTTGGAAATATTAGCATCGTTAACTCTCCAGAGGTTTGCAAGTTTTTGGAGGCCTCAAAGTTATCTTTCGTACCTGAATATGGCTCCAAGTTGAAAGAAGAATATGTGATGGTTAAGCATCTGCCAAACATTTCAAAGGAGGATGATTCTAGACAATGTTGTATTGTTCAATGTTTCAGTTGTTGCAATGACAACTGGCAAAAGGTTTGGGCTGTACTAAAACCTGGATTCTTGGCATTTCTGGCAGATCCTTTTGATACCCAACCTCTGGACATCATTGCTTTTGATGTGCTCCGTGCTTCAGATGGGAATCGAGAAGGTTGTGTATCACTAGCAACAGAAATGATTGAACCAAACCCTTTACGCCATTCATTCAAGGTGACTTCTGGAAATCGGAGCATTAGGGTAAGAGCAAAGAGTAGTGATAAAGTTAAAGATTGGGTTACTGCTATAAATGATGCTGGAGTAAAACCTCCTGAAGGCTGGTGTCATCCTCATCGCTATGGTTCTTTTGCTCCTCCAAGAGGCTTGATTGAAGATGATAGCCAGGCTCAGTGGTTCATAGATGGTCAAGCAGCATTTGAAGCCATTTCTTCTTCAATTGAGGATGCAAAATCGGAGATATTTATTTGTGGGTGGTGGCTTTGCCCAGAGCTGTATCTGCGGCGTCCTTTTCACTCTCATGCTTTATCAAGGCTTGATAATTTGCTGGAAGCAAAGGCTAAGCAAGGGGTTCAGATTTTTATTCTTCTCTACAAAGAGGTGGCTCTTGCCTTGAAAATCAACAGCATATACAGCAAGAAAAAGCTTCTCAGCATTCATGAGAATGTGAGGGTATTACGTTATCCTGATCACTTTTCTAGTGGCATTTACTTGTGGTCCCACCATGAAAAACTGGTTATTGTTGATCACCAGATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGACACACCTGCGCACAGAGTGGGAGATTTCCCTCCTTTGATGTGGCCTGGAAAGGACTATTATAACCCTAGGGAATCTGAACCAAATTCCTGGGAAGATACAATGAAAGATGAATTAGATCGTGGAAAATATCCTCGTATGCCATGGCATGATGTTCACTGTGCCCTTTGGGGACCACCTTGTCGTGACATTGCTAGGCACTTTGTTCAGCGCTGGAATTATGCGAAGAGGAACAAGGCTCCATATGAGCAAGCAATACCATTACTTATGCCCCAGCATCACATGGTTATTCCACACTACTTGGGTAAAGACAAAGAATTGGAGATTGAAAATGAGAGGCCTATCAATCATAGAAGAATCAGAAGGGATGATTCCTTTTCCTTATCACCATCCCAAAATATTCCTCTGCTTTTGCCTCAGGAATCTGGTGGGCCGCATACTCCTAAAGGATACCAGGAATCAAATGGGTTAAGAACCTTTTCAAATCTCAATCAACAAACCAAGATGAGTGCTGGTCTTCCTCCCCTATTCCAGAAGGCCAAAATTCAACCAGTTAGCTCAGATAAACCAATGAAAGGCTTTGTAGATGAGCTTGATTATATTAATGAAAGTGGAAAAATGTCTCAAGAGAGAATTGCTTGTGTCAGCACAAAAGGCACAGATTCAGAATGGTGGGAGGCACAAGAACGGGGTGATCAGGGAGGCTTTGCAGATGTATCTGGACAAGTTGGTCCCCGTGCTTCATGCCGCTGTCAGGTTATTAGGAGTGTTAGTCAATGGTCTGCTGGGACAAGCCAAACTGAACAGAGCATCCACAATGCTTATTGCTCTCTAATTGAGAAAGCTGAATACTTCATCTACATCGAGAATCAATTTTTTATCTCAGGTCTTTCAGCAGATGAGATGATACAAAATCGTGTGTTAGAAGCTTTATATCAACGGATTATGCGAGCTTACAATGATCAAAAAATTTTTAGAGTTATAATTGTCATCCCACTCCTTCCTGGCTTCCAGGGGGGCCTTGATGATAGTGGTGCGGCATCTGTCAGAGCCATAATGCATTGGCAGTATCGAACCATTTGCAGAGGACAAAAATCTATATTGCATAATCTGTGTGATCTCCTGGGTCCAAAAGCCCATGATTACATATCTTTCTTTGGCCTCAGGGCTTATGGAAGGCTATATGATGGGGGTCCTTTGGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATCGTCGATGACTGTACAACTTTGATAGGATCTGCTAATATTAACGATAGAAGTTTACTTGGCTCCAGAGACTCAGAGATTGGCGTTGTAATAGAAGACAGAGAGTTAACTGGATCATATATGGGTGGGAAACCATGGAAAGCAGGAAAGTTCTCGATGACTCTTCGAATGTCATTATGGTCTGAACACTTGGGTCTCCAAGCAGAAGAGATTGATCAAATAGTTGACCCAATTGTGGAGTCTACTTACAAGGACATTTGGATGGCAAGGGCAAAGAGAAATACTGCAATTTATCAAGATGTCTTTTCTTGCGTACCAAATGATCTGATACACACCAGAGTTGCTTTCAGACAAAGCACAGCTCGCTGGAAAGAAAAAATTGGCCACACAACTATTGATATAGGAATTGCCCCAAACGTGTTGGAATCTTTTCATAATGGAACTATCAAGAATACCGATCCCTTGGAGAGATTAGCTTCAGTGAAGGGTCATCTTGTTTCTTTTTCCTTGCAGTTCATGTGTCAAGAAAATTTAAAACCTGCCTTCAATGAAAGCGAGTACTACGCTTCTCAAGTTTTCCATTGA 3333 0.4281 MASEESVTGGGSRYVQLPPDPPPTIMSPVASHRQGGPEPNRIFDEMPKATIVSVSRPDAGDISPMLLSYTIEFQYKQFKWELVKKASQVIYLHFALKKRAFIEEINEKQEQVKEWLQNLGIGENTTMVQDDEEVEDDTILHYDECAKDRDVPSIAALPIIRPALGGQQSISDRAMVAMQGYLNHFFGNISIVNSPEVCKFLEASKLSFVPEYGSKLKEEYVMVKHLPNISKEDDSRQCCIVQCFSCCNDNWQKVWAVLKPGFLAFLADPFDTQPLDIIAFDVLRASDGNREGCVSLATEMIEPNPLRHSFKVTSGNRSIRVRAKSSDKVKDWVTAINDAGVKPPEGWCHPHRYGSFAPPRGLIEDDSQAQWFIDGQAAFEAISSSIEDAKSEIFICGWWLCPELYLRRPFHSHALSRLDNLLEAKAKQGVQIFILLYKEVALALKINSIYSKKKLLSIHENVRVLRYPDHFSSGIYLWSHHEKLVIVDHQICFIGGLDLCFGRYDTPAHRVGDFPPLMWPGKDYYNPRESEPNSWEDTMKDELDRGKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPYEQAIPLLMPQHHMVIPHYLGKDKELEIENERPINHRRIRRDDSFSLSPSQNIPLLLPQESGGPHTPKGYQESNGLRTFSNLNQQTKMSAGLPPLFQKAKIQPVSSDKPMKGFVDELDYINESGKMSQERIACVSTKGTDSEWWEAQERGDQGGFADVSGQVGPRASCRCQVIRSVSQWSAGTSQTEQSIHNAYCSLIEKAEYFIYIENQFFISGLSADEMIQNRVLEALYQRIMRAYNDQKIFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQKSILHNLCDLLGPKAHDYISFFGLRAYGRLYDGGPLATSQVYVHSKIMIVDDCTTLIGSANINDRSLLGSRDSEIGVVIEDRELTGSYMGGKPWKAGKFSMTLRMSLWSEHLGLQAEEIDQIVDPIVESTYKDIWMARAKRNTAIYQDVFSCVPNDLIHTRVAFRQSTARWKEKIGHTTIDIGIAPNVLESFHNGTIKNTDPLERLASVKGHLVSFSLQFMCQENLKPAFNESEYYASQVFH 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1095 1110 Pfam Phospholipase D Active site motif 476 503 IPR001736 GO:0003824
Prci4g1095 1110 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 476 503 IPR001736 GO:0003824
Prci4g1095 1110 PANTHER PHOSPHOLIPASE D 170 1100 IPR015679 -
Prci4g1095 1110 Gene3D Endonuclease Chain A 706 966 - -
Prci4g1095 1110 SUPERFAMILY PH domain-like 247 339 - -
Prci4g1095 1110 FunFam Phospholipase 741 961 - -
Prci4g1095 1110 Pfam PH domain 237 339 IPR001849 -
Prci4g1095 1110 SMART pld_4 476 503 IPR001736 GO:0003824
Prci4g1095 1110 SMART pld_4 907 934 IPR001736 GO:0003824
Prci4g1095 1110 CDD PH_PLD 192 339 - -
Prci4g1095 1110 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 907 934 IPR001736 GO:0003824
Prci4g1095 1110 SUPERFAMILY Phospholipase D/nuclease 748 956 - -
Prci4g1095 1110 PIRSF PLD_euk 645 1110 IPR016555 GO:0004630|GO:0006654|GO:0048017
Prci4g1095 1110 PIRSF PLD_euk 48 617 IPR016555 GO:0004630|GO:0006654|GO:0048017
Prci4g1095 1110 Pfam PLD-like domain 836 954 IPR025202 -
Prci4g1095 1110 CDD PLDc_vPLD1_2_yPLD_like_2 767 951 - -
Prci4g1095 1110 Gene3D Endonuclease Chain A 361 598 - -
Prci4g1095 1110 ProSiteProfiles PH domain profile. 250 341 IPR001849 -
Prci4g1095 1110 MobiDBLite consensus disorder prediction 1 36 - -
Prci4g1095 1110 Gene3D - 232 340 IPR011993 -
Prci4g1095 1110 SUPERFAMILY Phospholipase D/nuclease 326 596 - -
Prci4g1095 1110 Coils Coil 98 118 - -
Prci4g1095 1110 CDD PLDc_vPLD1_2_yPLD_like_1 369 513 - -
Prci4g1095 1110 SMART PH_update 215 343 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1095 Prci-Chr4 8386714 8399581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1095 1 987 Phospholipase D Gene Family (Wang group) AT3G16785 69.369 0.0 1353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1095 K01115 - gmx:100780514 1837.39