Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1092 ATGGGGAGAATGGGACAGGAAGAATCAGATTTGAAAACCCAGTTAGTTTTGGACATTTGCTCCATCTCTACTCGTTCTGTGGTATGCGTCCATAGGCTTCTCTCAAACCCAGCTAAGCCACCTTCTTTCATTGATTGGTACCACATTCTTGGAGTGGAAGAAAATGCAGGGTCAAATACCATTCGCAAGCGATACCATAAGCTAGCCTTGCAACTTCACCCGGACAAGAATAACCATCCCAAGGCTGAAATTGCCTTCAAGCTTGTCTCTGAGGCATATACATGTTTGTCTGATGCTGCAAAGAGAAAAGCCTTCGAGTTAGAGAGATGGAAGAATTTCTGCTTTGAGTGCAAAAGGATCCCATATTCATCGTCTGACAGTGCTCCTCGAAATTCCAATGGCGGTTCAAGTTTCAAGGTATGGAACATTATCAGCAGGTCAAGATCCTATAAGCTTTGGAAAAATATAAAGGAGATTAGAGAGAGATTCAAGGAGGAGGCTAAGGTGATAGAGAACTGTTTGAGAGCAAATTCAATGTCAAGGAAAGAATCTCCACTTTACAATCCAGCAGATTATTTAGAAAGAAGCAAGTCTCAACGCAGAACAGAGAAAGAAACACCTGTGTTCAATCCATCAGACTACTTGTACCAAGGCTATCCTCATCTGAGAAGCCAAATTTTCAAGAATTCTGATAGGTTTTGGTACTTACAGACAGCAAATAATATACTTAATGATAGGGGAGGAGCCCAGTATGACTCCCCAGTTTTTGAAGTCAGACCAGAAAGGAGAATGTTCACCAGCAAATTTGCTTATGTCCCGTCATGA 825 0.4182 MGRMGQEESDLKTQLVLDICSISTRSVVCVHRLLSNPAKPPSFIDWYHILGVEENAGSNTIRKRYHKLALQLHPDKNNHPKAEIAFKLVSEAYTCLSDAAKRKAFELERWKNFCFECKRIPYSSSDSAPRNSNGGSSFKVWNIISRSRSYKLWKNIKEIRERFKEEAKVIENCLRANSMSRKESPLYNPADYLERSKSQRRTEKETPVFNPSDYLYQGYPHLRSQIFKNSDRFWYLQTANNILNDRGGAQYDSPVFEVRPERRMFTSKFAYVPS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1092 274 ProSiteProfiles dnaJ domain profile. 45 109 IPR001623 -
Prci4g1092 274 CDD DnaJ 45 98 IPR001623 -
Prci4g1092 274 Pfam DnaJ domain 45 105 IPR001623 -
Prci4g1092 274 SMART dnaj_3 44 101 IPR001623 -
Prci4g1092 274 PANTHER BNAC03G44070D PROTEIN 23 235 - -
Prci4g1092 274 PRINTS DnaJ domain signature 65 80 IPR001623 -
Prci4g1092 274 PRINTS DnaJ domain signature 81 101 IPR001623 -
Prci4g1092 274 PRINTS DnaJ domain signature 47 65 IPR001623 -
Prci4g1092 274 Gene3D DnaJ domain 44 156 IPR036869 -
Prci4g1092 274 SUPERFAMILY Chaperone J-domain 37 108 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1092 Prci-Chr4 8357457 8359123 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1092 45 106 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 43.939 1.14e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1092 - - gmx:100801809 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g1092 4 8357457 8359123 Prci4g1092 4 8357457 8359123 ECH