Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1071 ATGGTTTCGGATTCCCATTGCTGCTGCTGCTGCTTCCTCATCTTCCTCTTCTTCTTCGTTCTGCCTTCCATTTCTCGTGCCCAGACTGCCACCTGCAATGGCATACTCTTGTCCTACGCCTATGCCAGCGGAAAACGCCTGCCGCCCAATGTCTCCGATCCCACGCAGCAACCGTACCGATTCGAGTCCACGATCACTGTGCTCAACAATGGACTCGACGAACTCAAGTCCTGGAAGGTGTTTGTGGGGTTCCAGCACAACGAGTTCTTAGTCTCTGCTTCAAATGCGGTGCTCGGCGACGGCACTAGCCTTCCAGCTGGCGTCGGGAACGGAACCGTTTTTGCTGGGTACCCGATGACTGATCTCAAGACGGCGGTCGAGACCGCCGGGGACTCGACGCAGATGCAGGTTCAGATCGATTTGGTCGGCACGGTGTTCGGTGTGGCGCCTCCCAGCGTGCCGATGCCCTCAAACATCACCCTCGCCAATGATGGATTCGTATGTCGTAAGCCCATTGGTCAAGGTAAGAATGAAACTCGAGTCTGTTGTACAAAAGATCCCAAATTCAAGACAAACATAACTACAGATGAGGAATTCCTGCCCCGCCAGAATGGTGATCTTACAATCATGTATGATGTGACCAGAACTTATGATTCCAATTACTGGGCAGAGGTTACAATCTCTAATCATAACCCCCTTGGCCGTCTTGACAACTGGAAATTAAACTGGGACTGGATGAGGGGTGAGTTTATTTATTCAATGAAGGGTGCTTATCCAACTAATGTGGATTCTTCTGAATGTATATTTGGTCCACAAGGGACCTACTATAAAGATCTTGACTTTGCCAATGTACTGAATTGTGAAAGAAGGCCAACGATAATTGATCTCCCTCCCACAAAGTTTAATGACTCGGACCTCGGGAAGATTCCTTTTTGCTGCCGGAATGGTACAATCTTGCCACCATTGATGGACCCAAGTATGTCATCTTCAAGATTTCAAATGCAGGTCTTTAAATTGCCACCAGACCTCAATCGCTCCCAGCTTTCACCACCACAGAACTGGAAGATAAGTGGTACACTCAACCCTGACTACAAGTGTGGCCCACCCATCAGAGTAAGTCCTAGTGAAACCCCAGATCCTTCAGGCATACCATCAAACAAATCTGCAATGGCAAGCTGGCAGGTTGTGTGTAATATAACACAGGTCAAAGGATCACCGCGTAAATGCTGTGTCTCATTTTCTGCATATTACAACGAGTCTGTCATTCCTTGCAAAACATGTGCATGTGGGTGCGCCAGTAACACAGGAAAAACTTGCAGTACTACGGCACCAGCTATGCTTCTTCCACCAGAGGCACTTCTTGTTCCTTTTGTGAATCGGACTGCTAAGGCTCTTGCTTGGGCTAGTCTCAAACATCTATCGGTTCCAAAGCCATTGCCGTGTGGTGATAACTGCGGCGTGACAATAAACTGGCATCTTCTTACAGATTACAGCCGGGGATGGAGTGCAAGGGTCACACTTTTCAATTGGGGTGACACTAGTTTTGCTGACTGGTTTGCTGCTGTGCAAATGGACAAAGCAGCTGCAGGTTTTGAGAAAATGTATTCATTCAATGGAAGTACCTTGGATGGTGTTAACAATACAATATTTATGCAAGGTCTTCCAGGATTGAACTACCTTGTGGCAGAAACTGATGGTGCAAACCCTGCAAGTGATCCGAGGGTGCCCGGCAAACAACAGTCAGTGATCTCTTTTACAAAGAAAACTACTGCCGGAGTCAATGTGGCAGGTGGAGATGGATTCCCTACTAAAGTCTTCTTCAATGGGGAGGAATGCTCTCTCCCCTCTGTGTATCCGACCAATGGATATAAGAAGGAATCTTCCATGGCTACTTCAATGATCTTGACATTGCTTCTGTTGGTATTTTTGTGGCAATAG 1938 0.4757 MVSDSHCCCCCFLIFLFFFVLPSISRAQTATCNGILLSYAYASGKRLPPNVSDPTQQPYRFESTITVLNNGLDELKSWKVFVGFQHNEFLVSASNAVLGDGTSLPAGVGNGTVFAGYPMTDLKTAVETAGDSTQMQVQIDLVGTVFGVAPPSVPMPSNITLANDGFVCRKPIGQGKNETRVCCTKDPKFKTNITTDEEFLPRQNGDLTIMYDVTRTYDSNYWAEVTISNHNPLGRLDNWKLNWDWMRGEFIYSMKGAYPTNVDSSECIFGPQGTYYKDLDFANVLNCERRPTIIDLPPTKFNDSDLGKIPFCCRNGTILPPLMDPSMSSSRFQMQVFKLPPDLNRSQLSPPQNWKISGTLNPDYKCGPPIRVSPSETPDPSGIPSNKSAMASWQVVCNITQVKGSPRKCCVSFSAYYNESVIPCKTCACGCASNTGKTCSTTAPAMLLPPEALLVPFVNRTAKALAWASLKHLSVPKPLPCGDNCGVTINWHLLTDYSRGWSARVTLFNWGDTSFADWFAAVQMDKAAAGFEKMYSFNGSTLDGVNNTIFMQGLPGLNYLVAETDGANPASDPRVPGKQQSVISFTKKTTAGVNVAGGDGFPTKVFFNGEECSLPSVYPTNGYKKESSMATSMILTLLLLVFLWQ 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1071 645 Pfam COBRA-like protein 221 400 IPR006918 GO:0010215|GO:0016020
Prci4g1071 645 PANTHER COBRA-LIKE PROTEIN 7 27 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1071 Prci-Chr4 8208900 8211713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1071 32 630 COBRA Gene Family AT4G16120 68.106 0.0 880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1071 - - gmx:100803929 1075.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g1071 4 8208900 8211713 Prci4g1071 4 8208900 8211713 ECH