Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1070 ATGGTGGATCTGAGCGGGAAAGGATCGGAAGCCGAGGACGCTAATGCGAGGAATCCGAACGGGACTTCGTCGGAAGAAAGCCCAAAGAAGACTTGCGCCGATTGCGGCACCAGCAAGACCCCTCTATGGAGGGGTGGTCCGGCCGGGCCAAAGTCACTGTGCAACGCATGTGGTATCAAAAGCAGGAAGAAGAAGAGAGCGATTCTGGGTTTGAACAAGGGAAGCAACGAAGAGAAGAAGAGAAGTAGCAATAATAACAATCGAAGCAGCAAGATTGGGGACAGCTTGAAGCAGAGACTAATGGCTTTAGGAAGGGAGGTTTCGATGCAGAGGAACAAGTTGGGAGAGGAAGAACAAGCAGCAGTTCTGTTGATGGCTCTCTCCTATGGATCCGTTTATGCTTAG 405 0.5111 MVDLSGKGSEAEDANARNPNGTSSEESPKKTCADCGTSKTPLWRGGPAGPKSLCNACGIKSRKKKRAILGLNKGSNEEKKRSSNNNNRSSKIGDSLKQRLMALGREVSMQRNKLGEEEQAAVLLMALSYGSVYA 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1070 134 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 28 66 - -
Prci4g1070 134 SMART GATA_3 26 76 IPR000679 GO:0006355|GO:0043565
Prci4g1070 134 MobiDBLite consensus disorder prediction 15 34 - -
Prci4g1070 134 ProSiteProfiles GATA-type zinc finger domain profile. 26 62 IPR000679 GO:0006355|GO:0043565
Prci4g1070 134 PANTHER OS01G0976800 PROTEIN 13 134 - -
Prci4g1070 134 Pfam GATA zinc finger 32 66 IPR000679 GO:0006355|GO:0043565
Prci4g1070 134 CDD ZnF_GATA 31 66 IPR000679 GO:0006355|GO:0043565
Prci4g1070 134 ProSitePatterns GATA-type zinc finger domain. 32 57 IPR000679 GO:0006355|GO:0043565
Prci4g1070 134 MobiDBLite consensus disorder prediction 1 50 - -
Prci4g1070 134 MobiDBLite consensus disorder prediction 70 85 - -
Prci4g1070 134 Gene3D - 27 92 IPR013088 GO:0006355|GO:0008270
Prci4g1070 134 MobiDBLite consensus disorder prediction 67 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1070 Prci-Chr4 8198909 8200002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1070 29 134 C2C2-Gata Transcription Factor Family AT3G06740 68.696 4.14e-47 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Prci4g1070 GATA 1.9e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1070 - - cave:132190023 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g1070 4 8198909 8200002 Prci4g1070 4 8198909 8200002 ECH