Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1067 ATGTCCAAAGGAACTAGTCTAGTGCTGGATTCATCTGAAAATGGCACAGATTTGTCTCAGGATGATATTGGCACCATTGAGGAAACCCCGGAAGAGTCAATTTTGTCACGACAAACTTCTGTGAACCTTCTTCCTTTTATCGGTCAAAGATTTGTTTCTCAAGAAGCTGCTTATGAATTTTATTGCAGTTTTGCGAAACAATGTGGCTTTTCAATTAGACGGCATCGCACTCGAGGAAAGGATGGGGTTGGTCGGGGAGTTACTAGACGGGATTTCACATGCCATCGTGGTGGTTATCCCCAGATTAAGCCGTCTGATGATGGAAAGATGCAAAGAAATCGCAAGTCTTCTCGTTGCGGCTGTCAAGCATACATGCGCATTGTCAAAAGGGCAGATTTTGATGTCCCTGAATGGCGAGTGACGGGATTTAGCAACATCCATAATCATGAGTTATTAAAATCCAATGAGGTGCGTCTTCTTCCAGCATATTGTGCAATATCTCCAGATGACAAGAGCCGTATCTGCATGTTTGCTAAAGCTGGAATGTCAGTGAGGCAAATGTTAAGACTGATGGAGCTTGAGAAAGGCATCAAACTTGGTTGTTTACCGTTCACAGAGATTGACGTGAGAAACTTGTTGCAGTCATTTAGAAATGTTGATAGAGACAATGATGCTATTGATCTTATTGCTATGTGCAAGAGACTAAAAGATGAAAACCACAACTTCAAGTATGAGTTTAAGATTGATAGTAATAACAGGCTAGAGCATATTGCCTGGTCTTACACTTCATCTGTTCAATTGTATGAGTCATTTGGAGATGCTGTGGTTTTTGATACAACGCATCGTCTGGATGCCTATGACATGTTGTTGGGAATTTGGCTTGGAGTGGACAATCATGGAATGACTTGTTTCTTTGGTTGTACCCTTCTGCGGGATGAAAATATTCAGTCTTTTTCATGGGCTCTAAAGGCATTCTTAAGCTTCATGGAAGGAAAGGCTCCGCAGACCATGTTAACTGATCATAACATGTGGCTGAAAGAAGCCATTGCTGTTGAAATGCCTGAAACCAAACATGCCTTTTGCATATGGCACATTATTGCGAAGTTCTCTGACTGGTTTTCTGTACTTCTTGGATCACATTATGATGAGTGGAAAGCTGAGTTCCATCGGCTCTACAATTTGGAACTGGTGGAAGATTTTGAGGAAGGCTGGGGGCAAATGGTTGATAAATATGCACTCCATGCGAATAAGCACATTGTTAGCTTATACTCATTAAGGACATTTTGGGCTTTACCGTTCTTGAGGTGCTACTTCTTTGCAGGATTGACCAGCACAAGCCAATCTGAGTCCATTAATGCTTTCGTCCAACGGCTCTTGGGTGCCCAGTCTCAACTAAATCGCTTTGTAGAGCATGTTGCCGATATTGTTGAATTTAATGACCGGGCTGGGTCAAAGCAAAAGATGCAACGAAAACTGCAGAAAGTGTGCCTTAAAACCGGTTCACCTATTGAATCCCATGCTGCTACAATGCTTACTCCTTATGCCTTTAATAAACTGCAGGATGAGCTAGTTTTGGCACCACAATATGCATCATTTCTGGTTGATGAAGGTTGCTTTCAGGTCAGACACCACACTCAGATGGATGGAGGGTGCAAAGTATTTTGGGTTCCTTGCCAGAACATGAGCTGCAGCTGCCGTCTGTTTGAGTTTTCAGGCATCTTATGCAGACATATTTTAAGAGTCATGTCAAATAATAACTGTTTTCACATTCCTGACCAATATGTACCTACCCGTTGGCGTGGTACCTGTTCATCTTCTGCTAACCCCTTCAGGGTTACAACTTCCAGGGATCATTCTGAAAGAATAGAATTGTTGGAATCCATGGTTTCAACACTTGTCATGGAATCCATTGAAACAGAGGAACGCCTTGGTGCTGCTTGCGAGCAAATCTCCATGGTTTTATCGCGTATCAAAACCCTTCCTAGGTCAACACATGGGGTGAATGGCATTGCATATAATTATCAATCAGAGTCACTGATACTGCCGGAGGTGGATGATGCTGATGGTATAATTCATGGTTTTACGATTACAAATCCCCATGATTCCATCACTTTAGGAAAACTAAAGGAGAGAAGGGCAAGAGATGGAGTTGATATAAGTAGGAAGCGGAGACATATTTCAGGGCCATTGTGTGGGCATTACGGACATGATGCATCTGATTGCTCGACAATGGCTGGTGATAACTTGAATGGGGACGCACTAGGTTACTCGTAG 2274 0.4261 MSKGTSLVLDSSENGTDLSQDDIGTIEETPEESILSRQTSVNLLPFIGQRFVSQEAAYEFYCSFAKQCGFSIRRHRTRGKDGVGRGVTRRDFTCHRGGYPQIKPSDDGKMQRNRKSSRCGCQAYMRIVKRADFDVPEWRVTGFSNIHNHELLKSNEVRLLPAYCAISPDDKSRICMFAKAGMSVRQMLRLMELEKGIKLGCLPFTEIDVRNLLQSFRNVDRDNDAIDLIAMCKRLKDENHNFKYEFKIDSNNRLEHIAWSYTSSVQLYESFGDAVVFDTTHRLDAYDMLLGIWLGVDNHGMTCFFGCTLLRDENIQSFSWALKAFLSFMEGKAPQTMLTDHNMWLKEAIAVEMPETKHAFCIWHIIAKFSDWFSVLLGSHYDEWKAEFHRLYNLELVEDFEEGWGQMVDKYALHANKHIVSLYSLRTFWALPFLRCYFFAGLTSTSQSESINAFVQRLLGAQSQLNRFVEHVADIVEFNDRAGSKQKMQRKLQKVCLKTGSPIESHAATMLTPYAFNKLQDELVLAPQYASFLVDEGCFQVRHHTQMDGGCKVFWVPCQNXMSCSCRLFEFSGILCRHILRVMSNNNCFHIPDQYVPTRWRGTCSSSANPFRVTTSRDHSERIELLESMVSTLVMESIETEERLGAACEQISMVLSRIKTLPRSTHGVNGIAYNYQSESLILPEVDDADGIIHGFTITNPHDSITLGKLKERRARDGVDISRKRRHISGPLCGHYGHDASDCSTMAGDNLNGDALGYS 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1067 758 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 40 628 IPR031052 GO:0006355
Prci4g1067 758 MobiDBLite consensus disorder prediction 1 31 - -
Prci4g1067 758 SMART 26again6 562 589 IPR006564 GO:0008270
Prci4g1067 758 ProSiteProfiles Zinc finger SWIM-type profile. 554 587 IPR007527 GO:0008270
Prci4g1067 758 MobiDBLite consensus disorder prediction 1 23 - -
Prci4g1067 758 Pfam MULE transposase domain 275 367 IPR018289 -
Prci4g1067 758 Pfam SWIM zinc finger 563 584 IPR007527 GO:0008270
Prci4g1067 758 Pfam FAR1 DNA-binding domain 59 152 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1067 Prci-Chr4 8162474 8166928 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci4g1067 MULE 9.1e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1067 - - qsa:O6P43_021818 1380.16