LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci4g1066	ATGTTTCTGTATTATAAAAATATATTACATGAAGGTCTATTTACTTTTGCTTCAAGAATGGGAGTTGAGAAAGCAGGAACAAAAAGTGGAGGTGGACACGTTGGTGGGTTTTTCCAGTTGTTTGACTGGACTTCAAAATCTCGGAAGAAACTGTTTGCTTCTAAGTCAGATGTACCAGAATCTTTGAAGCAGGGAAAAAAAGTTGATGGCAACTTGGCAATGACACGGCCCTATGTGGTGATGAATGAAGATGAAATTGGAGCCGGGGCAAGTGTTAGAGGAAGTGATCATAGTTATGCTTCATCAGTTACAGATGATGAGGCATGTGGAACAAGGGTCCCAGGCGTAGTTGCTCGGCTTATGGGATTAGATGCTCTACCCCCTTCTGGTTTTCCTGAGCCCTATTCTTCTCCATATTTTGATACCCCATCCCTTCAAGATGCTCAATGTTGCAGGAAAAATCTCAACTATCAGTATGATCATGCCATTTATTCTGGAAATTTGGGTGAAAAAGTTGAGAGCTCTTCGAGGAACTTCATGGAGCCAAAGCCCCGGAAGACCGTTAGCAGGCCAATTGAGAAGTTCCAAACAGAAGTATTGCCACCTAAGTCAGCTAAATCGATTCCTGTTACACATCATAAGCTTTTGTCTCCTATCAAGAGTCCTGGCTTTGTTCCAAGCAACAACCCTGCTTATATAATGGAAGCAGCTGCAAGGATTATCGAACCTCGGCCCCAAGCTACTGTAAAGCCTAAAACTCCATCGATAGCTTCGTCTTCTGTGTCATTGAAGGTTCGAGGACTTAAAGAAAAAGTGGAGGCTTCACAAAAAGGACCTCTTTTTGGGTTATCTACAGTAAAATCCAGAGCCAGAGATTTGAAAGAAAAAAGAGAGGTTTCTCAAAGAACAATTAGGCTTTCCGAACGTTCTCAAAAATTGGTTGAGTCAAATGCTGCTATGTATCTCAAGGGACAGTCCTTAAATAAAAGTTGGAATGGATCTACGGATTCATCCATTGGATCAACGGATGCAGGAGAAGATTTTTCACTACAGAATAAAGGAAAGTCTATCTCGCTTGCAATCCAAGCAAAAGTGAATGTTCAAAGGAGGGAAGGCTTGAGTTTGAATGGCAGTAGAGGTTTGGTGGGGCAGAAAGAACATCACGAGCTTAAACCCAACCCACCTTTGAGGACTAATGTTCAAAAGAATTTGCAGAAAAAATCTTCTGTGCAGGGTACTAATGGTGTTCTCCGAAAAACAATCAAAAACAGAATTGTTCGGTTGATAAGGGCAAGCTACCATCAAAGGCATCAATTTCCAATGATAGGAAAGTTCTGTCGGGGGGCTCATCCTACGGACGTCATAGAACTTCTAGTAGTAGATCTGCCGGGAAACCCAAAACTGGTACAAGGAAGTCAAGCTTGGGTGCCTCAGATTGTGAAAATGAAGTTTTCTATACCAGTACAAATAATTTCCCTAGAAAGAAAAGGTCCACCGACAAGGACTGGAATGATCGGGAGATGCTTTGAGTATTCTTTTAGAGCAGAAACTAAGGAATTAATGTATGGAGCTGATACTCCATATAACAGCTCTTCTAAAGCCTGGACGTCTTCTAGTATTGCATCAAACTCAGTAGATCCGATATCTTCCCCTAGTTTAGTTAATCCCCTCCCAAGATTCCAACAAAAGGACCAAGACGTGATATCTACAGATACCTTATGCACCAGGCAATATTCTGACATCTCTCCCACTAGTCTTCCAGATGTAACATCAAAACATAAGTCATTGGTTGTTGATGGGATGAAGGAGTTTAGGTCCAATCATATGGAATCACAGTTATTCAACTGTCGACACCCAAGTCCAATCTCTGTTCTTGAACCTTCTTTCTCAACTGAAAGTTGTGAATCTCTAGTCAGCACAAGTGCTATTAATAGCACAGGAGAAAGCAAGTTGTGCTCATCTGTCCAAGCTCAGGAAGTCTTTGGTCCGAACACTTCAAGGAAGTTTTATCATGCAGAAGCTGACACTGAGTTATCAGATTCAGCTTCTTCAACCTCATCTGGAACTATTTTAAAGAAGCATACAGGTACATTTTCTGTAATGAAGTTTGGAAGATCGAGTACATGGGAATTGGACTATGTGAAAGAAATATTGTGTAATGTAGAACTGATGTTTATGGACCATGCCCTTGGTCAAGCACGAGAGATTGTGAGCCCCCATCTATTCAATCAGTTGGAAAGCATGAAAGAAGGGTTTGAGAATGTTGGTGGTGAGTCAAGGATAAACAGGAAAGTTATGTTTGATTGTGTGAGTGAATGCATGGACACAGCGTGTAGGCGTTATGCATGTGGGGGATACAAAATGTGGGCCAAAGGGGTCATGAAGGTGAGAAAGAATGAACGGTTGGCTGAGGAAGTGTACAAAGAGATTTCTAGTTGGGGAGCCATGGGGGATTCAATGGTCGATGAACTTGTAGATAAGGACATGAGCAGCCAATATGGACGATGGCTCAATTTTGATGTTGATGCTTTTGAACTAGGAGCAGAGGTTGTGGATCAAATATTTGATTCTTTGGTCAATGATTTTGTCGCTGAAATCTTGCAAAATTAA	2610	0.4149	MFLYYKNILHEGLFTFASRMGVEKAGTKSGGGHVGGFFQLFDWTSKSRKKLFASKSDVPESLKQGKKVDGNLAMTRPYVVMNEDEIGAGASVRGSDHSYASSVTDDEACGTRVPGVVARLMGLDALPPSGFPEPYSSPYFDTPSLQDAQCCRKNLNYQYDHAIYSGNLGEKVESSSRNFMEPKPRKTVSRPIEKFQTEVLPPKSAKSIPVTHHKLLSPIKSPGFVPSNNPAYIMEAAARIIEPRPQATVKPKTPSIASSSVSLKVRGLKEKVEASQKGPLFGLSTVKSRARDLKEKREVSQRTIRLSERSQKLVESNAAMYLKGQSLNKSWNGSTDSSIGSTDAGEDFSLQNKGKSISLAIQAKVNVQRREGLSLNGSRGLVGQKEHHELKPNPPLRTNVQKNLQKKSSVQGTNGVLRKTIKNRIVRLIRASYHQRHQFPMIGKFCRGAHPTDVIELLVVDLPGNPKLVQGSQAWVPQIVKMKFSIPVQIISLERKGPPTRTGMIGRCFEYSFRAETKELMYGADTPYNSSSKAWTSSSIASNSVDPISSPSLVNPLPRFQQKDQDVISTDTLCTRQYSDISPTSLPDVTSKHKSLVVDGMKEFRSNHMESQLFNCRHPSPISVLEPSFSTESCESLVSTSAINSTGESKLCSSVQAQEVFGPNTSRKFYHAEADTELSDSASSTSSGTILKKHTGTFSVMKFGRSSTWELDYVKEILCNVELMFMDHALGQAREIVSPHLFNQLESMKEGFENVGGESRINRKVMFDCVSECMDTACRRYACGGYKMWAKGVMKVRKNERLAEEVYKEISSWGAMGDSMVDELVDKDMSSQYGRWLNFDVDAFELGAEVVDQIFDSLVNDFVAEILQN	869

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci4g1066	869	MobiDBLite	consensus disorder prediction	377	397	-	-
	Prci4g1066	869	PANTHER	PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED	18	417	-	-
	Prci4g1066	869	Pfam	DUF761-associated sequence motif	101	131	IPR032795	-
	Prci4g1066	869	Pfam	Domain of unknown function (DUF4378)	710	861	IPR025486	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci4g1066	Prci-Chr4	8137981	8144173	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci4g1066	709	864	TRM (TON1 Recruiting Motif) Superfamily	AT5G26910	36.646	1.96e-25	111

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci4g1066	-		-	pcin:129308462	1709.89