Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1065 ATGTCCGCAGTAGTTGAAGATACAATATTAAGATCCAAGAAAGTATCTGCTGGAAAGTCTCCTTGCTGCGATAAAGTGGGTCTCAAGAGAGGACGATGGACTTCTGAAGAAGATAGAATCTTGACCGAATATATCCAGCAGCATGGCGAAGGCTCTTGGAGATCCTTGCCCAAAAATGCAGGGTTATTGAGGTGTGGCAAGAGTTGCAGACTGAGATGGATCAACTATTTGAGAGAAGACTTGAAGAGAGGAAACATCACTCCTCAGGAAGAAGCCATCATTGTGAAGCTTCATGGTGCCATCGGTAATAGGTGGTCTGTAATAGCGAGGCAGCTACCCGGAAGAACAGATAATGAGATCAAGAATTACTGGAACTCTCACCTGAGAAGAAAAATTTACTGCTTCATGAAAACCTCAAACTCCAATGACACTCTCCCACCGATTGACATTGCTGCTCTGAACGCCGCCGCTTCCTCCAAACGAGGAAGAGGCGGTCGAGGCAGACCAACTCAACCGCCCATGCAAGAAGAAGACAAGAACAATATCGCTTCAAACCAATTCTCGCACTCGGGTACGAATGCTCACGATCTGTTTAACAATATGCATCGAAGAAAAACGAGTCCAGATGAAGCTGAGGCAACTTCAATGGTCGGTTATGAATCTTGGAGCCAGAATCATCACCAAGAAGAGACCGCTGATTGTATTGGTTTGGATGCATATTGTATGATGAGTAGTGATGATACTACAAACGGAAAAGCAGCATTTTGCCCCAACATGGATGGAGAAGGTGAGGCCTTGGGGCCATTTCAATGGCTAGATGAAGAAATAATGAAACTTAATTACATGTTTGAAAGTGGGATGCTTGTAAACCCAATCAGTAGCGGAAATAACAGTATGGGAAGAGAATATGAGTACGGAGAGGTGGGTGGTGAAAAGGGTATACATATTCCAACAAGCGAGGATAGTAAAAGTGGTGTTTGGAGCTCAGTATCAAATTACTCAGATCAGAGTAGGGAGTGGCATAACGGTCATCCTAATAATAGCAGCAGTTCATCATCAGTGAATTCTGTTTACGATTATCAGTGGGCTGATTGGGATATTTCAGCTAGTGCTGAGTCCCATCATAATCAATGGAACCTGCAGCACTTTGAAGAAAACCAGATGATGACTTGTTTGTGGGATGCCACTGCAAATAGTGAAGCATACAACTTCCACTGA 1218 0.4384 MSAVVEDTILRSKKVSAGKSPCCDKVGLKRGRWTSEEDRILTEYIQQHGEGSWRSLPKNAGLLRCGKSCRLRWINYLREDLKRGNITPQEEAIIVKLHGAIGNRWSVIARQLPGRTDNEIKNYWNSHLRRKIYCFMKTSNSNDTLPPIDIAALNAAASSKRGRGGRGRPTQPPMQEEDKNNIASNQFSHSGTNAHDLFNNMHRRKTSPDEAEATSMVGYESWSQNHHQEETADCIGLDAYCMMSSDDTTNGKAAFCPNMDGEGEALGPFQWLDEEIMKLNYMFESGMLVNPISSGNNSMGREYEYGEVGGEKGIHIPTSEDSKSGVWSSVSNYSDQSREWHNGHPNNSSSSSSVNSVYDYQWADWDISASAESHHNQWNLQHFEENQMMTCLWDATANSEAYNFH 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1065 405 ProSiteProfiles Myb-like domain profile. 25 77 IPR001005 -
Prci4g1065 405 ProSiteProfiles Myb-like domain profile. 78 128 IPR001005 -
Prci4g1065 405 FunFam Myb transcription factor 27 83 - -
Prci4g1065 405 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 77 IPR017930 -
Prci4g1065 405 CDD SANT 32 77 IPR001005 -
Prci4g1065 405 Gene3D - 87 132 - -
Prci4g1065 405 SMART sant 82 130 IPR001005 -
Prci4g1065 405 SMART sant 29 79 IPR001005 -
Prci4g1065 405 CDD SANT 87 128 IPR001005 -
Prci4g1065 405 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 132 IPR017930 -
Prci4g1065 405 Pfam Myb-like DNA-binding domain 83 128 IPR001005 -
Prci4g1065 405 Pfam Myb-like DNA-binding domain 30 77 IPR001005 -
Prci4g1065 405 Gene3D - 27 83 - -
Prci4g1065 405 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 18 220 - -
Prci4g1065 405 MobiDBLite consensus disorder prediction 156 178 - -
Prci4g1065 405 SUPERFAMILY Homeodomain-like 27 124 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1065 Prci-Chr4 8129198 8134694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1065 18 385 MYB Transcription Factor Family AT5G49330 39.547 1.27e-73 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci4g1065 Myb_DNA-binding 1.7e-13 CL0123