Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1055 ATGGCAAACAACTCAACGGGGCAGCTCGTTGGTTCAGAGATACATGGATTCCATACATTGCGAGATCTGGATGTTAGGAACACTATGGAGGAAGCAAAAGGCAGATGGCTTCGTCCTAATGAGATTCATGCTATACTTAGTAATTCCAAGTATTTCAACATCCGTGTGAAGCCAGTGCATTTGCCTCCAAGTGGTACTATTGTATTATTTGACCGCAAGATGCTTAGGAACTTTCGAAAAGATGGATACAACTGGAAAAAGAAAAAGGATGGGAAAACTGTCAAGGAAGCTCATGAACATTTAAAAGTTGGTGATGAAGAAAGGATCCATGTTTACTATGCGCATGGCCAAGATAACCCAAGACTTGTGCGTAGATGTTATTGGCTTCTTGACAAGAGTCTGGAACACGTAGTGCTTGTTCATTATCGTGAAACAAAAGAGTTGCAGGGCTCTCCAACTACACCTGTAAATTCAAATTCTAGTTCAAGTTCTGATCCAACTGCACCATTGATTTTATCCGAAGAATTGGATTCTGGGACCAACAATCCATATGCTGGTGAAATTAATGACAATTCAAAACTCAAGAGTCATGAGCAGAGGCTTCTTGAGCTTAACACGCTTGAATGGGATGATCTTGTGGTTACAAATGATCTTAACAGTTCCACCACATCTATTGGAGCCAAGGTTTCATATTTTGATCAACAAAATCAGCCTTTGCTGAATCGCAATTTGAACAATGTAAGCTGCAGTCTGTCTGCTGAAATTCCTTCTCTTGATGACATAACACAACCTATAACTGGGAGTGCACCTTATAGTTTCCCAGAAACTATAGATCTTCTGACAAAAGATAATCAAGAAAATCCAAATCCGCAGAAGGGATATCCTGTCTCCGTGGGTGGTGTTGATTCCTTGGACACTTTGGTCAATGATAATTTGCAGAGTCAGGACAGCTTTGGAAGGTGGATCAACCACATGATTTCTGATCCGCATTGTTCTGTGGAAGAGTCATCTATTGAGTCGCCTGTTATGTCCATTCAAGAACCATATTTCCCTGTAGAGGATCATCAGCAACCTCTGCCTGAAAAACTTTTTAACCTCACCGAGGTCTCGCCTGCATGGGCTTATTCCACTGAGAATACCAAGATCCTGCTCACTGGAATCTTTCATTATAACTATCTGCACCATGAAAAGTCCGATCTATTTTGTGTCTGTGGTGATGTAAGTGTTCGGGTTGAAATTGTTCAAGTTGGGGTCTACCGATGCTGGGTATCACCACATTCCCCAGGATTCGTGAATCTCTATATGAGCCTTGATGGCCATAAGCCCATAAGCCAGGTTGTCAATTTTGAGTATCGTACTCCAATTTTGCATGAGCCTACAGCCTCTATAGGAGAGACGTGCAACTGGGCTGAGTTTCGACTTCAAACGAGGCTTGCTTCTTTGCTTTTTGGTACTCATAAGAGTCTTGATATTATCTCTAATAAAGTATCACATAATGCAATAAATGAGGCTAGGAACTTTGCTTCAAAGACCTCATTGGTTTCCAACAGTTGGCAATACTTGCTTAAGTCAACTGAAGGCAACAAAACTCCATTTCCTCGAGCCAAAGATGCACTATTTGAAACGTCCTTGAAAAACAGATTAAAGGAGTGGCTATTGGAAAGAATTCTCTTGGGCCGTAAGACTACTGAATATGATTCTCAAGGTCAAGGTGTAATCCATCTGTGCGCAATTCTGGGATATAATTGGGCTATTTCAATATTTTCAGGATCGGGCTTGTCACTAGATTTTCGTGATAAATTTGGATGGACAGCTCTTCATTGGGCAGCATACTGTGGAAGGGAGAAAACGGTTGCACTGCTGTTGTCTGCTGGGGCAAAGCCTAACTTAGTCACAGATCCCACTCCACAACATCCTGGTGGATGTACTGCTGCTGATCTTGCTTTCATGAAGGGTTATGAAGGCTTAGCAGCTTATCTTTCAGAAAAATCTCTGGTTGAGCAGTTCAACGACATGAGCTTAGCTGGAAATATCAGTGGCAAACTGGAAACAAACACAAATGATCCAGCAGATTATGACAATCTCACTGCGGACCAGCTATACCTAAAGGATACATTAGCAGCTTACCGAACAACTGCTGAGGCTGCAGCACGAATACAGGCTGCATTTAGGGAGCACTCGTTCAAAGTACGAGCAAAGGCAGTTCAGATTTTAAATCCAGAGGACGAAGCCCGTATGATTGTTGCAGCAATGAAGATTCAGCATGCCTATCGCAACTATAACACAAGGAGGATGATGGCAGCTGCAGGTCGCATCCAGCATAGGTTCCGTACATGGAAATTGCGCAGAGAATTTCTCAACATGCGACAGCAGGCTATCAGAATCCAAGCTGCTTTCCGGGGCTACCAAGTGCGGAAGCAGTATCGTAAAATTCTCTGGTCTGTTGGAGTACTTGAAAAGGCAGTCCTGCGGTGGCGATTAAAGAGAAAAGGCTTCCGTGGACTTCAGGTAAATCCTGTCCAACAAGAGCAAGAACCAAAGCTGGAAAGTGACACAGAAGAGGACTTCTTCCGGCTTGGTCGGAAACAAGCTGAAGAACGTGTGGAGAGATCTGTAGTACGTGTTCAGGCCATGTTCCGTTCAAAGAAAGCACAAGAAGATTATAGGAGGATGAAGCTGGCTCACAATCAGGCAAAGCTGGAACTCGAATTAGAAGAGCTACTCAATTCAGAGGTTGATATTCTATAG 2748 0.4301 MANNSTGQLVGSEIHGFHTLRDLDVRNTMEEAKGRWLRPNEIHAILSNSKYFNIRVKPVHLPPSGTIVLFDRKMLRNFRKDGYNWKKKKDGKTVKEAHEHLKVGDEERIHVYYAHGQDNPRLVRRCYWLLDKSLEHVVLVHYRETKELQGSPTTPVNSNSSSSSDPTAPLILSEELDSGTNNPYAGEINDNSKLKSHEQRLLELNTLEWDDLVVTNDLNSSTTSIGAKVSYFDQQNQPLLNRNLNNVSCSLSAEIPSLDDITQPITGSAPYSFPETIDLLTKDNQENPNPQKGYPVSVGGVDSLDTLVNDNLQSQDSFGRWINHMISDPHCSVEESSIESPVMSIQEPYSXPVEDHQQPLPEKLFNLTEVSPAWAYSTENTKILLTGIFHYNYLHHEKSDLFCVCGDVSVRVEIVQVGVYRCWVSPHSPGFVNLYMSLDGHKPISQVVNFEYRTPILHEPTASIGETCNWAEFRLQTRLASLLFGTHKSLDIISNKVSHNAINEARNFASKTSLVSNSWQYLLKSTEGNKTPFPRAKDALFETSLKNRLKEWLLERILLGRKTTEYDSQGQGVIHLCAILGYNWAISIFSGSGLSLDFRDKFGWTALHWAAYCGREKTVALLLSAGAKPNLVTDPTPQHPGGCTAADLAFMKGYEGLAAYLSEKSLVEQFNDMSLAGNISGKLETNTNDPADYDNLTADQLYLKDTLAAYRTTAEAAARIQAAFREHSFKVRAKAVQILNPEDEARMIVAAMKIQHAYRNYNTRRMMAAAGRIQHRFRTWKLRREFLNMRQQAIRIQAAFRGYQVRKQYRKILWSVGVLEKAVLRWRLKRKGFRGLQVNPVQQEQEPKLESDTEEDFFRLGRKQAEERVERSVVRVQAMFRSKKAQEDYRRMKLAHNQAKLELELEELLNSEVDIL 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1055 916 ProSiteProfiles IQ motif profile. 766 792 IPR000048 GO:0005515
Prci4g1055 916 Gene3D - 766 813 - -
Prci4g1055 916 Gene3D - 537 671 IPR036770 -
Prci4g1055 916 SMART ANK_2a 641 672 IPR002110 GO:0005515
Prci4g1055 916 SMART ANK_2a 602 631 IPR002110 GO:0005515
Prci4g1055 916 ProSiteProfiles Ankyrin repeat profile. 602 634 IPR002110 GO:0005515
Prci4g1055 916 SUPERFAMILY Ankyrin repeat 557 664 IPR036770 -
Prci4g1055 916 MobiDBLite consensus disorder prediction 149 189 - -
Prci4g1055 916 Pfam Ankyrin repeats (3 copies) 557 631 IPR002110 GO:0005515
Prci4g1055 916 SMART CG_1_2 29 146 IPR005559 GO:0003677
Prci4g1055 916 FunFam Calmodulin-binding transcription activator 2 765 813 - -
Prci4g1055 916 ProSiteProfiles IQ motif profile. 789 813 IPR000048 GO:0005515
Prci4g1055 916 MobiDBLite consensus disorder prediction 149 190 - -
Prci4g1055 916 SUPERFAMILY E set domains 366 453 IPR014756 -
Prci4g1055 916 ProSiteProfiles CG-1 DNA-binding domain profile. 25 151 IPR005559 GO:0003677
Prci4g1055 916 ProSiteProfiles IQ motif profile. 870 898 IPR000048 GO:0005515
Prci4g1055 916 ProSiteProfiles Ankyrin repeat region circular profile. 602 630 - -
Prci4g1055 916 Gene3D Immunoglobulins 361 456 IPR013783 -
Prci4g1055 916 Coils Coil 882 911 - -
Prci4g1055 916 SMART iq_5 746 768 IPR000048 GO:0005515
Prci4g1055 916 SMART iq_5 868 890 IPR000048 GO:0005515
Prci4g1055 916 SMART iq_5 712 734 IPR000048 GO:0005515
Prci4g1055 916 SMART iq_5 788 810 IPR000048 GO:0005515
Prci4g1055 916 Pfam CG-1 domain 31 144 IPR005559 GO:0003677
Prci4g1055 916 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 24 898 - -
Prci4g1055 916 Pfam IQ calmodulin-binding motif 792 810 IPR000048 GO:0005515
Prci4g1055 916 MobiDBLite consensus disorder prediction 279 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1055 Prci-Chr4 8003731 8014964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1055 29 902 CAMTA Transcription Factor Family AT3G16940 55.416 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Prci4g1055 CG-1 3.5e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1055 K21596 - gmx:100793970 1300.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g1055 4 8003731 8014964 Prci4g1055 4 8003731 8014964 ECH